Gene Dde_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1617 
Symbol 
ID3755044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1665690 
End bp1667567 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content60% 
IMG OID637782496 
ProductG3E family GTPase-like protein 
Protein accessionYP_388109 
Protein GI78356660 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000670583 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTACAG ATTTTTTCAT GCCGCCATCG GGCGGGGCAG CCACAGCCGG CCAGTTGTGT 
GCTCTGCCGG CCAATGCCAT TGCCGTAGCC TGCCGTGATG ACCGCTTCAG GCGGCTGGTG
CGCTGGCTCG GGCTGGCCCG CTGTCAGGGG GCGGAAGGTG CTTTTACCTG CCGTGTGGCT
GATATGCCGG GAGTGTTCGG GCTGGCATGC GAAGAAGTAT GCTCTTCGGG CTGCACTCAG
CAGGCGCGTT TCGGCATTTA TTATTTTCCC CATGCGGACG AGCAGCTGTG TGATGCCATG
CGGCTTGATG CTGCTGTGCT GACGCAACAT ACGGCCTATG CGGCACGGGT GCGCGGCTTT
GCCACCGATC CTGATTTTGC GGGGCTGTTT CGAACCGGAA CACTGGATGT TCTGTATGGT
TCCGTGCCTG CGGCTTTCGG TTTGCGGCTT GTGGCTGAAA ACAGGCTGCG GATACGCTGC
GATGCCGGAT TGTACAGTGA AGAAACCGGC TGGGTGGTTG AGCCGGGCGG GCTGGAAGAA
GACCTGCCTG CGCTGCTGTT GTCCAGAAGG ATTTATGATG TGCTGGGCGC GGCTCTTTCT
GCATGTCTGC AGGAAGCCCC TGTGTTTTTT TCGCGCACGG AGTATGGCTG CGGACTGCGG
CACAGACAGG CTGACGGCAG TGTCAGGCTT GACGAACGGG CGGAAGGAGC CGATGCCGGG
CGCCGTACCG GCGAACTGCT TGTCTGGGGT AACGTCGGCA GTCTGACTGC AGACATTGAC
GCGGGCCCTC AGCCGGGCGC AGAGGTGTTG TCATATGTTG CCTGCACTGA CTGCAACGTG
CAGAAAGGAA ACATGCCGGA AGAAGTGGCG GCGGCCCCCT GCTGGGTGGC GCATGATCTT
GAATCGGAAG CCTGCGGCCG CATGCATCCG GTGCTCAACG ACAGGCGACC TGCCCTTGTG
GTGGTCAGCG GTTTTCTGGG GTCCGGAAAA ACAACTTTTC TCAACAACTG CATAGAATAC
CACCGTGCCC GCGAACGCTT TGTGGCTGTT ATTCAGAATG AAATGGGGGC TACCGGCGTC
GACGGGCATC TGCTGGGCGA TTCCGCGTCT GTTCTGGCAC TGGATGAAGG CTGTGTGTGC
TGCACTCTGG CAGGCAGTCT GGCTGCGGGG GTGCGTGATC TGACAGCGCG TTTCAACCCT
CAGGTGATTC TGCTGGAAAC AACAGGACTT GCCAATCCGC TGAACCTGCT GGAGGAAATG
GGCTCGCTTC GTGAGCTTGT GCGGCTGGAA TGCATGGTAA CCGTTGTGGA TGCCGCAAAC
GGAATTTCGA CGCTGTCTGA CAGCGAAGTC GCCCGCGACC AGATACGGGG GGCAGATGTC
GTCGTCTGCA ATAAATGTGA TGTGGCCGGG CCGCAAGCCG TTGCCGCCCT GAAGGACGCT
GTGCAGGGCC TTAACCCCAG AGCAATGATT CATACGACGG AGTTCGGCAG CGTGCACCCA
GCACTGTTCA TGGATGCCGG CGATGGCAGA AGCGGCAGCG GCCTGATGCC GGCCGTACCC
GCGGCGCATG CCGACCACAG ACACGAAGGC TATGGCGCTG TACGTTTTTT CATGCCGCAC
CCCGTTTCGC GGGAGCAGCT GCGGCAGGCT GTGCAGCAAT GCCCGGGGCA ACCGTTCCGC
ATCAAGGGGA TAGTAACCTC GGCAGGGCAG GACGCAGACC TGCGGGAGAG TCTGCTGGTC
CAGCATGTGG CTGGCAGGAC GGATTTTGAA CTGTTGGGTG GCTTTGAGGG AAAGCCCTTT
GTGGTTGTCA TCGGTAAAAA CCTTGATGAC GAAGCGCTGT ACAGTCATTG GCAGCGGCTG
GGAGCAACGC GGGAATAA
 
Protein sequence
MLTDFFMPPS GGAATAGQLC ALPANAIAVA CRDDRFRRLV RWLGLARCQG AEGAFTCRVA 
DMPGVFGLAC EEVCSSGCTQ QARFGIYYFP HADEQLCDAM RLDAAVLTQH TAYAARVRGF
ATDPDFAGLF RTGTLDVLYG SVPAAFGLRL VAENRLRIRC DAGLYSEETG WVVEPGGLEE
DLPALLLSRR IYDVLGAALS ACLQEAPVFF SRTEYGCGLR HRQADGSVRL DERAEGADAG
RRTGELLVWG NVGSLTADID AGPQPGAEVL SYVACTDCNV QKGNMPEEVA AAPCWVAHDL
ESEACGRMHP VLNDRRPALV VVSGFLGSGK TTFLNNCIEY HRARERFVAV IQNEMGATGV
DGHLLGDSAS VLALDEGCVC CTLAGSLAAG VRDLTARFNP QVILLETTGL ANPLNLLEEM
GSLRELVRLE CMVTVVDAAN GISTLSDSEV ARDQIRGADV VVCNKCDVAG PQAVAALKDA
VQGLNPRAMI HTTEFGSVHP ALFMDAGDGR SGSGLMPAVP AAHADHRHEG YGAVRFFMPH
PVSREQLRQA VQQCPGQPFR IKGIVTSAGQ DADLRESLLV QHVAGRTDFE LLGGFEGKPF
VVVIGKNLDD EALYSHWQRL GATRE