Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1617 |
Symbol | |
ID | 3755044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1665690 |
End bp | 1667567 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637782496 |
Product | G3E family GTPase-like protein |
Protein accession | YP_388109 |
Protein GI | 78356660 |
COG category | [R] General function prediction only |
COG ID | [COG0523] Putative GTPases (G3E family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000670583 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTACAG ATTTTTTCAT GCCGCCATCG GGCGGGGCAG CCACAGCCGG CCAGTTGTGT GCTCTGCCGG CCAATGCCAT TGCCGTAGCC TGCCGTGATG ACCGCTTCAG GCGGCTGGTG CGCTGGCTCG GGCTGGCCCG CTGTCAGGGG GCGGAAGGTG CTTTTACCTG CCGTGTGGCT GATATGCCGG GAGTGTTCGG GCTGGCATGC GAAGAAGTAT GCTCTTCGGG CTGCACTCAG CAGGCGCGTT TCGGCATTTA TTATTTTCCC CATGCGGACG AGCAGCTGTG TGATGCCATG CGGCTTGATG CTGCTGTGCT GACGCAACAT ACGGCCTATG CGGCACGGGT GCGCGGCTTT GCCACCGATC CTGATTTTGC GGGGCTGTTT CGAACCGGAA CACTGGATGT TCTGTATGGT TCCGTGCCTG CGGCTTTCGG TTTGCGGCTT GTGGCTGAAA ACAGGCTGCG GATACGCTGC GATGCCGGAT TGTACAGTGA AGAAACCGGC TGGGTGGTTG AGCCGGGCGG GCTGGAAGAA GACCTGCCTG CGCTGCTGTT GTCCAGAAGG ATTTATGATG TGCTGGGCGC GGCTCTTTCT GCATGTCTGC AGGAAGCCCC TGTGTTTTTT TCGCGCACGG AGTATGGCTG CGGACTGCGG CACAGACAGG CTGACGGCAG TGTCAGGCTT GACGAACGGG CGGAAGGAGC CGATGCCGGG CGCCGTACCG GCGAACTGCT TGTCTGGGGT AACGTCGGCA GTCTGACTGC AGACATTGAC GCGGGCCCTC AGCCGGGCGC AGAGGTGTTG TCATATGTTG CCTGCACTGA CTGCAACGTG CAGAAAGGAA ACATGCCGGA AGAAGTGGCG GCGGCCCCCT GCTGGGTGGC GCATGATCTT GAATCGGAAG CCTGCGGCCG CATGCATCCG GTGCTCAACG ACAGGCGACC TGCCCTTGTG GTGGTCAGCG GTTTTCTGGG GTCCGGAAAA ACAACTTTTC TCAACAACTG CATAGAATAC CACCGTGCCC GCGAACGCTT TGTGGCTGTT ATTCAGAATG AAATGGGGGC TACCGGCGTC GACGGGCATC TGCTGGGCGA TTCCGCGTCT GTTCTGGCAC TGGATGAAGG CTGTGTGTGC TGCACTCTGG CAGGCAGTCT GGCTGCGGGG GTGCGTGATC TGACAGCGCG TTTCAACCCT CAGGTGATTC TGCTGGAAAC AACAGGACTT GCCAATCCGC TGAACCTGCT GGAGGAAATG GGCTCGCTTC GTGAGCTTGT GCGGCTGGAA TGCATGGTAA CCGTTGTGGA TGCCGCAAAC GGAATTTCGA CGCTGTCTGA CAGCGAAGTC GCCCGCGACC AGATACGGGG GGCAGATGTC GTCGTCTGCA ATAAATGTGA TGTGGCCGGG CCGCAAGCCG TTGCCGCCCT GAAGGACGCT GTGCAGGGCC TTAACCCCAG AGCAATGATT CATACGACGG AGTTCGGCAG CGTGCACCCA GCACTGTTCA TGGATGCCGG CGATGGCAGA AGCGGCAGCG GCCTGATGCC GGCCGTACCC GCGGCGCATG CCGACCACAG ACACGAAGGC TATGGCGCTG TACGTTTTTT CATGCCGCAC CCCGTTTCGC GGGAGCAGCT GCGGCAGGCT GTGCAGCAAT GCCCGGGGCA ACCGTTCCGC ATCAAGGGGA TAGTAACCTC GGCAGGGCAG GACGCAGACC TGCGGGAGAG TCTGCTGGTC CAGCATGTGG CTGGCAGGAC GGATTTTGAA CTGTTGGGTG GCTTTGAGGG AAAGCCCTTT GTGGTTGTCA TCGGTAAAAA CCTTGATGAC GAAGCGCTGT ACAGTCATTG GCAGCGGCTG GGAGCAACGC GGGAATAA
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Protein sequence | MLTDFFMPPS GGAATAGQLC ALPANAIAVA CRDDRFRRLV RWLGLARCQG AEGAFTCRVA DMPGVFGLAC EEVCSSGCTQ QARFGIYYFP HADEQLCDAM RLDAAVLTQH TAYAARVRGF ATDPDFAGLF RTGTLDVLYG SVPAAFGLRL VAENRLRIRC DAGLYSEETG WVVEPGGLEE DLPALLLSRR IYDVLGAALS ACLQEAPVFF SRTEYGCGLR HRQADGSVRL DERAEGADAG RRTGELLVWG NVGSLTADID AGPQPGAEVL SYVACTDCNV QKGNMPEEVA AAPCWVAHDL ESEACGRMHP VLNDRRPALV VVSGFLGSGK TTFLNNCIEY HRARERFVAV IQNEMGATGV DGHLLGDSAS VLALDEGCVC CTLAGSLAAG VRDLTARFNP QVILLETTGL ANPLNLLEEM GSLRELVRLE CMVTVVDAAN GISTLSDSEV ARDQIRGADV VVCNKCDVAG PQAVAALKDA VQGLNPRAMI HTTEFGSVHP ALFMDAGDGR SGSGLMPAVP AAHADHRHEG YGAVRFFMPH PVSREQLRQA VQQCPGQPFR IKGIVTSAGQ DADLRESLLV QHVAGRTDFE LLGGFEGKPF VVVIGKNLDD EALYSHWQRL GATRE
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