Gene Dde_1594 details

Gene Information

• Locus tag: Dde_1594
• ID: 3755000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: +
• Start bp: 1622731
• End bp: 1624659
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637782472
• Product: methionyl-tRNA synthetase
• Protein accession: YP_388086
• Protein GI: 78356637
• COG category: [J] Translation, ribosomal structure and biogenesis; [R] General function prediction only
• COG ID: [COG0073] EMAP domain; [COG0143] Methionyl-tRNA synthetase
• TIGRFAM ID: [TIGR00398] methionyl-tRNA synthetase; [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.736389
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAACCTT TTTACATCAC GACCCCCATT TACTACGTTA ACGCCAAGCC CCATCTGGGA 
CATGCATATA CGACCATCGT GGCTGATGCG CTGCGCCGTT TTCATACGCT GCTGGGCAAG 
AAAACCTTTT TTCTGACCGG TACCGACGAA CACGGGGATA AAATAGTGCA GGCTGCCGAA 
AAAAACGGCT GCACCCCGCA GGAATATGTG GACTCCATAA GTGCCACTTT CCGTGACCTG 
TGGCCCTCCA TGGGCATTAC CTATGACCGT TTTGTCCGCA CCACCGATGA ATCGCATAAA 
AAATGCGTAC AGGCCGTCCT GCAGAAGGTG TACGACAGCG GAGATATTTA TTTCGGCGAA 
TATGGCGGGC ACTACTGTTA CGGGTGTGAA CGTTTTTATA CCGAAAAAGA GCTGGAGAAC 
GGACTTTGTC CGCAGCATCA GGTCAAGCCG GAATACATTG CCGAAAAGAA CTACTTCTTC 
AGAATGTCCA AATATCAGGA CTGGCTGAGG CAGTATATTC TGGACAATCC CGATTTTATC 
CGCCCCGAGC GGTATCGTAA CGAAGTGCTT TCGCTGCTGG ACAGCGGCGC GCTTGAAGAC 
CTGTGCATTT CCCGTCCCAA AAGCCGCCTT TCATGGGGGG TGGAACTGCC GTTTGACACG 
GATTACGTGT GTTACGTGTG GTTTGACGCG CTGCTGAACT ATGTGTCGGC GCTTAACTGG 
CCCGACGGAG AAGAGTTTAC GACGTTCTGG CCCGGAGTGC AGCATCTGGT GGCCAAGGAC 
ATTCTGAAGC CCCATGCCGT GTTCTGGCCC ACCATGCTTA AAGCGGCCGG GTTTGAACCG 
TACAACAACC TGAATGTGCA CGGTTACTGG CTGGTGCGCG ACACCAAAAT GTCCAAGTCG 
CTCGGTAATG TCATAGAGCC TCTTGAAATG GCCGGCCGGT ACGGGCTGAG TGCTTTCCGG 
TATTTTCTGC TGCGCGAGAT GCATTTCGGC AGCGACGCCA GTTTTTCCGA AGAGGCACTG 
GTAGCCCGTC TTAATGCTGA TCTGGCCAAT GATCTCGGCA ACCTGTTCAG CCGTGTGCTT 
TCCATGACAG GTAAGTACTT TGACGGTGTG GTACCTTCTC CTGCCGCATA TACTGCGGAT 
GATGAAGATA TCATCAATCT GGCCAAGGAT GCCTGCCGCA ACTATGTCCG CCTGTTTGAA 
CGCGTGCGCT TTTCCAATGC GCTGGAATCA TTGTGGGAGC TTGTGCGCGC GCTGAACAAG 
TATGTGGACA GCAGCGCCCC GTGGACGCTT TATAAAACCG GTGACACGGC CCGGCTGGGC 
ACTGTGCTGT ACGTGCTGCT GGAATGCATG CGGAAAGTCG CTGTCAATCT GTGGCCTGTC 
ATGCCCGAAG CGTCCGAAGC AATGCTGGGT CAGCTGCATG TATGCTTTGA CTCTGCCGGT 
ACCAGGCTGC AGGATGAAGC CGAAGCCTGG GGCACATTGC AGGCGGGTGG CAAGGTCGAA 
GTTTCTTCCG GTCTTTTCCC GCGGGTGGAG GTGGCAAAGG AAAAAGACCG CCCTGCCGAG 
CAGCCGGTTC CGAAAGCACA GCCAGTGGCA GTGCCTGCTG TCGAGTATGC CGAGTTCGAA 
GACTTTCAGA AGGTCGAGCT GCGCGTGGGC ACCGTGCTGA CAGTTGAAAA TCATCCCAAG 
GCGGATAAGT TGTACCGCAT CGAGGTCGAT CTGGGCGAAG AGCAGCCCAG ACAGATTATC 
GCCGGTTTGA AAGAATTCTT TGCCCCCGAT GCGCTGACGG GACGTCAGGT GGTCGTTGTG 
GCCAACCTGA AGCCGCGCAA ACTGCGCGGG TTGGAGTCGC AGGGGATGAT TCTGGCGTTG 
CGTACGGAAG ACGGCATGGA GTTGCTTACG GCATCCAATC CTGTTCCTGC CGGTACGCGG 
GCTTCTTGA 

 

Protein sequence

MQPFYITTPI YYVNAKPHLG HAYTTIVADA LRRFHTLLGK KTFFLTGTDE HGDKIVQAAE 
KNGCTPQEYV DSISATFRDL WPSMGITYDR FVRTTDESHK KCVQAVLQKV YDSGDIYFGE 
YGGHYCYGCE RFYTEKELEN GLCPQHQVKP EYIAEKNYFF RMSKYQDWLR QYILDNPDFI 
RPERYRNEVL SLLDSGALED LCISRPKSRL SWGVELPFDT DYVCYVWFDA LLNYVSALNW 
PDGEEFTTFW PGVQHLVAKD ILKPHAVFWP TMLKAAGFEP YNNLNVHGYW LVRDTKMSKS 
LGNVIEPLEM AGRYGLSAFR YFLLREMHFG SDASFSEEAL VARLNADLAN DLGNLFSRVL 
SMTGKYFDGV VPSPAAYTAD DEDIINLAKD ACRNYVRLFE RVRFSNALES LWELVRALNK 
YVDSSAPWTL YKTGDTARLG TVLYVLLECM RKVAVNLWPV MPEASEAMLG QLHVCFDSAG 
TRLQDEAEAW GTLQAGGKVE VSSGLFPRVE VAKEKDRPAE QPVPKAQPVA VPAVEYAEFE 
DFQKVELRVG TVLTVENHPK ADKLYRIEVD LGEEQPRQII AGLKEFFAPD ALTGRQVVVV 
ANLKPRKLRG LESQGMILAL RTEDGMELLT ASNPVPAGTR AS