Gene Dde_1556 details

Gene Information

• Locus tag: Dde_1556
• Symbol: thiH
• ID: 3755995
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: +
• Start bp: 1575356
• End bp: 1576525
• Gene Length: 1170 bp
• Protein Length: 389 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637782433
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_388048
• Protein GI: 78356599
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAAA TCAGCGCTGA CATGAGTGTG AGAACCGCAC AGGCGGGAGG TTTTTACGAA 
GTTGTCCGCC AGTTGCAGGA TGTGGATGTG CAGGCCGCCT GCATGGCGGC TGACGGATAC 
AGAGTGCGGC AGGCTCTGGC AAAGGATACC CTTTCTCCGG AAGACTTTCT GGCTTTGCTT 
TCACCCGCGG CCCGTCCGTA CATGGAATCA ATGGCGCATA AGGCCCGTGA TGTCACGGTG 
CGCCAGTTCG GCCGCACCAT CCAGCTGTTT ACTCCGCTGT ACCTTTCAAA CTGGTGTACA 
AACAGGTGCG TGTATTGCAG CTTCAATGCC TGCAGTGGCA TAGACCGCAT GCAGCTGGAT 
GCTGCGGGTG TGCTGCGCGA AGGGCAGGCC ATAGCCGCCA CAGGACTGCG CCATCTGCTG 
CTGCTGACCG GCGAGGCTCC GGCAAAGGCT TCCGTTGACT ACATCCGCGA CTGTGTGCGC 
GTGTTGCGTC CTCTGTTTCC GTCACTGAGT ATTGAAGTGT ACGCCCTGAC CGAGCCTGAG 
TACCGCACAC TTGCCGTTGC CGGTGTGGAC GGCATGACAC TTTTTCAGGA AACATATAAC 
GAGGCTTTGT ACCCGTCATT GCATCCTGCC GGTCCCAAAA GCAATTATCA TTTCAGGCTG 
GGGGCGCCGG AAAGAGCATG CCGTGCCGGA ATGCGCAATG TGAATATAGG TGCGTTGCTC 
GGACTGGATC AGTGGCAGCG TGATGCTTTT ATGACGGGTA TGCATGCCCT TTGGCTGCAG 
CACAGGTATC CGGGAGTGGA TATTGCTGTT TCGCTGCCGC GTATGCGTCC TTATGCCGGC 
AGTTTTCAGC CGGTGTGTGA CGTGGATGAT CGTGCGCTGG TGCAGATACT GCTGGCCATG 
CGGCTTTTTC TGCCGCGGTG CGGCATTACC ATTTCCACGC GCGAACGGCC TGCATTCCGC 
GATAATCTGA TACCGCTGGG AGTGACCCGC ATGAGTGCCG GTGTATCCAC CGCTGTGGGC 
GGACATGCTG AAAACGAACA TTCCTCTGTA GGGCAGTTTG AAATTTCTGA CCCGCGCAGT 
GTGGACGAGG TGGTTGAAGC CGTAAGCCGG GCCGGTTATC AGGCCGTGTT TAAAGACTGG 
CATCCGCTGG AAGACAGCTG CGCGGTATGA 

 

Protein sequence

MSEISADMSV RTAQAGGFYE VVRQLQDVDV QAACMAADGY RVRQALAKDT LSPEDFLALL 
SPAARPYMES MAHKARDVTV RQFGRTIQLF TPLYLSNWCT NRCVYCSFNA CSGIDRMQLD 
AAGVLREGQA IAATGLRHLL LLTGEAPAKA SVDYIRDCVR VLRPLFPSLS IEVYALTEPE 
YRTLAVAGVD GMTLFQETYN EALYPSLHPA GPKSNYHFRL GAPERACRAG MRNVNIGALL 
GLDQWQRDAF MTGMHALWLQ HRYPGVDIAV SLPRMRPYAG SFQPVCDVDD RALVQILLAM 
RLFLPRCGIT ISTRERPAFR DNLIPLGVTR MSAGVSTAVG GHAENEHSSV GQFEISDPRS 
VDEVVEAVSR AGYQAVFKDW HPLEDSCAV