Gene Dde_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1549 
Symbol 
ID3755988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp1567982 
End bp1568506 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content58% 
IMG OID637782426 
ProductTRAP-type C4-dicarboxylate transport system small permease component-like 
Protein accessionYP_388041 
Protein GI78356592 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.170274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCGTG TGGCGGACGT CTGTCATAAG GCTTCCGACC TGCTGGAGCG CCTCTGCCTT 
ATGGGGGCGG GGGCTCTCCT CGTGGTCAAC CTGCTGTCGG TTATGCTTGG TGTGTTTTCC 
CGTTTTTACC GTGCGCCCGT GTGGACAACT GATCTGGCAA AGGTCACGCT TGTCTGGATG 
GTCATGCTGG CTGCTGCTCC TGCTTTGAAG CGCGGCGAGC ACATGGCCAT TCACATTCTG 
GTCGACAGGC TGTCTCCCGG CGCCAGAAGG GCGGCTGTGA TATTCCGTAC ACTGGTGTTT 
GCGGGCATCC TTGTGCTTAT GATCTGGCTG GGCGGTGCAT ATGCTTACAA AATGCGTCTG 
TTCACCATTA TGACGCTGGG AGTGAAAAAA ACGATACCGT TGCTGGCGGT ACCCGTAGGC 
ATGGCGCTGA TGCTTGCAGA ATACGCATTG CAGCAGTTCA TCGCACTTGA TGCGCTGGCC 
GCCCGCCCCG TGCGCGGTGC ATCAGAGGGG GAAGACGCGT CATGA
 
Protein sequence
MGRVADVCHK ASDLLERLCL MGAGALLVVN LLSVMLGVFS RFYRAPVWTT DLAKVTLVWM 
VMLAAAPALK RGEHMAIHIL VDRLSPGARR AAVIFRTLVF AGILVLMIWL GGAYAYKMRL 
FTIMTLGVKK TIPLLAVPVG MALMLAEYAL QQFIALDALA ARPVRGASEG EDAS