Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1497 |
Symbol | |
ID | 3756050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1517482 |
End bp | 1518198 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637782375 |
Product | hypothetical protein |
Protein accession | YP_387991 |
Protein GI | 78356542 |
COG category | [S] Function unknown |
COG ID | [COG2928] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000491692 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCTC AGGATTCTTC AGGCGGCTTT ATGGCGTTGC TGCGCCGGTT CATCAAGGCA AACCTGTTTG CCGGCATACT GGTGCTTACC CCGCTGGTGG CGACTTTTCT CACACTGCGG GTGGCAGTGC GCTGGGTGGA CAAACTGCTG CTGCTCCTGC CGCCGCAGTA CCGTCCGGAG GCTTTTCTGC CTTTTGCCGT GCCGGGGCTG GGGTTTCTGC TGCTGATCGT GGTGCTGCTG GTCACAGGGC TGCTTGTGCG CAATTTTCTG GGGCGCCGCC TTGTAGATCT GGGCGACGCC ATTCTGGCAC GCATACCGCT GGTCAGTTCG CTGTACTCCG GTATCAAGCA GCTGGTGGAA ACCATATTCA CCTCTTCGCG CGATTTTCAG CGGGTGGTGC TGATAGAATA TCCACGCAAG GGGCTGTATA CCATGGCATT TGTCACAGGC GTTGCCGTGG GTGAAATTCA AAGCAAAACA GCCAGCAAAG TGCTGAACGT GTTTGTGCCC ACCACCCCGA ACCCCACTTC GGGCTTTTAC CTCATGGTGC CCGAAGCGGA TGTCATTCCG TTGGAAATGA ATGTGGAAGA TGCATTCAAA CTGCTTATTT CCGGCGGAAT TCTGAGTGCA GAGCACGAAA AGTCGAAAAA CAGAAAAAAG AAAACAGCCA TCAAGGCGAA GAACACATCC CAGGAGGAAA CGCATGATCC CTTATAA
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Protein sequence | MTAQDSSGGF MALLRRFIKA NLFAGILVLT PLVATFLTLR VAVRWVDKLL LLLPPQYRPE AFLPFAVPGL GFLLLIVVLL VTGLLVRNFL GRRLVDLGDA ILARIPLVSS LYSGIKQLVE TIFTSSRDFQ RVVLIEYPRK GLYTMAFVTG VAVGEIQSKT ASKVLNVFVP TTPNPTSGFY LMVPEADVIP LEMNVEDAFK LLISGGILSA EHEKSKNRKK KTAIKAKNTS QEETHDPL
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