Gene Dde_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1473 
Symbol 
ID3756065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp1493417 
End bp1494031 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content57% 
IMG OID637782351 
ProductTPR repeat-containing protein 
Protein accessionYP_387967 
Protein GI78356518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00324934 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATC ACAATCCGGG GCCTGCTTTC GGCCCGAGGC ACAACATAAC CAAGTATATT 
CTGGCAGCAC TGGGCGCCGC TCTGGCTGTC ATGCTCATCA CGTCGTTCAT CTACAGGATG 
AACCATCCTT CTCTTGTCAA ACAGGGCCGG GCGCCGCAAC AAAATGCAGC CCCGGAACAG 
AGCATGTCGG CCGCCGCAAC CGGCGAACTG ACTGAACTGA TGCGCATGAT GCAGGAAAAC 
CCTAACGATC CTGAAGTGCT GCAGACGCTT GCGCAGCATT TTATGGACAC AGGGGACTGG 
CAGCGTGCCC AGACGTTCCT CAACAAGCTT GTGGTGGCAG CTCCCGCTGA TTCCCGCCCG 
CTGTATATGC TGGGTATTTC GCAATACCAG CTGGGCCAGC ATGCCGAAGC GGCCACAACC 
TTTGAACGGC TCATAAAGCT GGAAGACGAC CCCATGGCGC GGTACAATCT GGCCGTGCTG 
TACGGTCATT TTCTGGGGGC ACCTGAAAAA GCCCGGCCGC ATCTGGAAGC CATACTCGCT 
TCCGGCACTG CCGGCGAAGA ACTGAAAGCC CGGGCCAAAG CCGAGCTGAC CGGCAACAAA 
CACGAAGACA AATAG
 
Protein sequence
MTNHNPGPAF GPRHNITKYI LAALGAALAV MLITSFIYRM NHPSLVKQGR APQQNAAPEQ 
SMSAAATGEL TELMRMMQEN PNDPEVLQTL AQHFMDTGDW QRAQTFLNKL VVAAPADSRP 
LYMLGISQYQ LGQHAEAATT FERLIKLEDD PMARYNLAVL YGHFLGAPEK ARPHLEAILA 
SGTAGEELKA RAKAELTGNK HEDK