| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1459 |
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| Symbol | |
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| ID | 3756090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1480835 |
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| End bp | 1482025 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637782337 |
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| Product | cytidine deaminase |
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| Protein accession | YP_387953 |
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| Protein GI | 78356504 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0295] Cytidine deaminase
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.116046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAAAT CTGTTATTGC CGCCATACCG CGTCCGTCGC ACATGGTGCG TTTTTGTGCG
CTGTTCTGCA CTGTGTGGCT GTTCTGCTGG CTGTTTGCTT TTCCGTTGCA GGCGGCACCG
CTTAAAGTGA TATACGGTTT TGACAGAGAG TTTCCGCCGT TTTCCTTTGA AGAAGCGCAG
GGCATTCCCA CGGGGTTTGA TGTGGACCTG CTTAAAGCTG TCCTCCGGGA TAAGCCGGTG
AAGCTGATCA TGCGTCCGCT TTCGTGGGAT CAGGTGCTGG TGGAACTTTC CGCCGGAAAT
ATCACGGTGA CATCCGGCAT GGCCAAGACA GCTCAGCGTG AGTTGTTGTA CCGCTTCACA
GAACGTCCCA CCCTGCCTGC GCGGGTTATG CTGTTTACCA AAAATCATAA CCGCGTGGGC
AATGTGCGCC TGTTGCGCGG GCAGACTGTT TCTGTGGAAA AAGGGTCGTT TCAGCAGCGT
GTGCTGGAAG GCTTCGGCGG GCTTAACGTC AAGCTGTTCA ATACCAAGGT GGATGCCCTG
CGGGCCCTGT ACAGGGACGA GGTTGTGGCA TACGGCGGGC CGGAGCGCAC GGCGTACTAT
TATATAGAAA AGCTGAAGCT GGGCGGGATA ACCACCGTCG GCACTCCGCT GCGTGTCACC
GACGTTTTTT ATGCGGTGAA CCGCGAAGAG CCTGAACTGC TCAAGTTAAT CAACGACGGC
ATGCTGGAAG TTATGCGCAA CGGTGAGTAT GACCGCATTT ACCGTAAATG GTTTGTGCCG
GAACTGTTGC CCGAAGAGCG TGCCGAACTG ATAAAACAGG CCACGGCAGC GGCTATCAAT
GCCTATGCGC CGTATTCCAG AGTGCCGGTG GGCGCTGCGG TGCTTACCCG CTCCGGAAAA
ATCTTCACAG GCTGCAATGT GGAGAATCCC ATGCTCAACC TTACGGGTAC GGCACTGCGT
ACGGCCACGC TTAAAGCCGT GTCGGAGGGC GACATAGGCA TCCGTGCAGT GGTGTCAGTG
GGACCGGACG GACGCCTTTT ATCACCTTCC GCTTCTGACA GACAGTTCCT CTACGAGTTC
GGACGTGGTA TACTGGCCCT GATAGAGCCT GAAAAAGGCG TCTACGAAGA GCGCATGCTC
TCTGAGCTGC TGCCGGAACC GTATGTCCAG CGTCCGGAGT GGCAGGAGTA G
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| Protein sequence | MPKSVIAAIP RPSHMVRFCA LFCTVWLFCW LFAFPLQAAP LKVIYGFDRE FPPFSFEEAQ
GIPTGFDVDL LKAVLRDKPV KLIMRPLSWD QVLVELSAGN ITVTSGMAKT AQRELLYRFT
ERPTLPARVM LFTKNHNRVG NVRLLRGQTV SVEKGSFQQR VLEGFGGLNV KLFNTKVDAL
RALYRDEVVA YGGPERTAYY YIEKLKLGGI TTVGTPLRVT DVFYAVNREE PELLKLINDG
MLEVMRNGEY DRIYRKWFVP ELLPEERAEL IKQATAAAIN AYAPYSRVPV GAAVLTRSGK
IFTGCNVENP MLNLTGTALR TATLKAVSEG DIGIRAVVSV GPDGRLLSPS ASDRQFLYEF
GRGILALIEP EKGVYEERML SELLPEPYVQ RPEWQE
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