Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1440 |
Symbol | |
ID | 3756110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1464695 |
End bp | 1465498 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637782318 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_387934 |
Protein GI | 78356485 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000312208 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATA CGGTTCTGGG GTGTATCGGT TGCGGCAACA TGGGCGGCGC CATCATGCGC GGTCTTGCCG GGGTGGAAGG ATTGCAGCTG GCCGGCTTTA ACCGCAGTGC CCCGAAAGTG GAAGCCCTGC GGGATGAAAT AGGCCTTGAG CCTGCTCCTG ATGCCGTGGC GCTGGCGCGG CGTGCCGACA TTATTCTGCT GGGCGTCAAG CCTGATCAGA TTTGCGATGT TATAGGGCAG GTGCGTCCTG TTCTGGATGC CGGCAAGGTG CTGGTTTCCA TTGCCGCCGG TGTTTCGCTG GAAGCCATGC GCAGCGCTGC TCAGGGGGCG GCCCCGGTGG TGCGGGTGAT GCCCAATACG CCGGCCATGG TCGGCAGGGG CATTTACGGC ATGTGTCTGG ACGATCCCGC CCTGTCTGCA GAAGCCGCAA CCGCTGTCCG GAACCTGTTT GCAGCCATCG GCAAGGTGAT TGTACTGCCC GAACAGAAGT TCGAGGCATT TACCGCTGTG GCCGGATGCG GTCCCGCCTA TGTCTTTCAT ATGATGGAAG CTGTCATCGA AGCCGCGGTA ACCGTAGGGT TTACGCGGCA GCAGGCCACA GAAATGGTGA CGGAGCTGTT TTCCGGCTCG TGCGCTCTGG CCGAACAGAC GGGAATACAT CCTTCGCTGC TGCGCGAGAT GGTCACTTCT CCGGCCGGAA CAACCATAGC CGGAACCAAC CACCTTGACC GCACCGCTGT GCGGGGACAC ATCATTGATG CCGTGCTGGC AGCCTATGAA AAAGGTCTGG CCATGCGCAG ATAG
|
Protein sequence | MKNTVLGCIG CGNMGGAIMR GLAGVEGLQL AGFNRSAPKV EALRDEIGLE PAPDAVALAR RADIILLGVK PDQICDVIGQ VRPVLDAGKV LVSIAAGVSL EAMRSAAQGA APVVRVMPNT PAMVGRGIYG MCLDDPALSA EAATAVRNLF AAIGKVIVLP EQKFEAFTAV AGCGPAYVFH MMEAVIEAAV TVGFTRQQAT EMVTELFSGS CALAEQTGIH PSLLREMVTS PAGTTIAGTN HLDRTAVRGH IIDAVLAAYE KGLAMRR
|
| |