| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1422 |
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| Symbol | |
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| ID | 3756131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1446597 |
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| End bp | 1447973 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637782300 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_387916 |
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| Protein GI | 78356467 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.164618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAA AACACACCAA ACAATCGGAG AACGCCTTGA CCGCTCTTAC CTCTGCGGCA
ATTGTCGGCG GCGGCCTTGC CGGATGCGAA TGCGCCCGCA AGCTGGCACG CGCCGGTATC
GCCGTGACTC TTTTTGAAAT GAAGCCCCAC AGCTTTTCAC CCGCCCATTC CTCGCCCGAA
CTGGGCGAGC TGGTATGTTC CAACTCGTTG CGCTCCGACG AGCCCGAAGC GGGCGTCGGC
GTTTTGAAAC AGGAAATGCG CGCACTGGGC AGTCTGGTGA TGGAAGTGGC AGAAGCCACG
CGTGTTCCGG CCGGTAAAGC ACTGGCAGTC GACAGAGGTC TTTTCGCAGC CTCCATGACG
GCAGCCATGG AGGCTGAACC GGGCATCACG CTGATACGTC GGGAAATCAC TTCGCTGGAC
GACCCCGCCC TGCAGGGGTT CGACGCGGTG GTCATCGCCG CCGGTCCTGT GGCCAGCGAA
AGCCTGAGCC GCAGCCTTGC CGATGCAGTG GGGGCGACAC ACCTGTATTT CTACGACGCC
ATAGCCCCCA TCATCAGCGC AGACTCCGTA AATATGGAAA AAGCCTTCTG GGGTTCACGC
TATCGCCCGG AAGACACCGA CTATCTGAAC TGCCCCATGA ACCGCGAAGA ATATTTCGCC
TTTCGCGAGG CGCTGGTGGA AGGCGAAAAG GCCGCTACCA AAGATTTTGA AAAAGAACTG
CACTTTGAAG GCTGCATGCC CATCGAGGCG CTGGCCGAGC GGGGAGAAAT GACGTTGGCG
TTCGGCCCGT TCAAACCCGT GGGACTGGAC GATCCGCGCA CCGGCAGACG CCCCTTTGCC
GTGGTGCAGC TGCGTACCGA AAACCTGAAC AAAACCATGT TCAACCTTGT GGGCTGTCAG
ACAAAGCTCA AGTACGGTGA ACAGGACAGG ATTTTCCGCA TGATTCCGGG TCTGGAAGAC
GCGGAATTCG TGCGCTACGG CTCGGTGCAC CGCAACACCT ACGTCAATGC GCCGCAGGTG
CTCAACGGCG ACCAGTCGCT GAAAAACCGC CCCGACGTAT TTCTGGCCGG ACAAATCACC
GGAGTGGAAG GCTATGTGGA GTCCGCCGCC AACGGCATGT GGCTGGGCAT GATGCTTGCG
GCCCGCAAGC ACGGAGAAAA CATCCCCCAG CCGCCTGTTG AGTGCGCTCT GGGTGCGCTG
GCGGCCCACC TGCGCACTCC GGTAAAAAAG TTTCAGCCTT CCAACATCAA CTTCGGTCTG
ACTCCGGAGC TGAATCAGCG GGCACGCAAA AAAGACCGCA AGGCCCTGTA CGCCGAACGG
GCACGCGAAA ACTTTACACA GTGGTACGCG TTGCTTCCCG CATCAGCCCG CAGCTGA
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| Protein sequence | MAQKHTKQSE NALTALTSAA IVGGGLAGCE CARKLARAGI AVTLFEMKPH SFSPAHSSPE
LGELVCSNSL RSDEPEAGVG VLKQEMRALG SLVMEVAEAT RVPAGKALAV DRGLFAASMT
AAMEAEPGIT LIRREITSLD DPALQGFDAV VIAAGPVASE SLSRSLADAV GATHLYFYDA
IAPIISADSV NMEKAFWGSR YRPEDTDYLN CPMNREEYFA FREALVEGEK AATKDFEKEL
HFEGCMPIEA LAERGEMTLA FGPFKPVGLD DPRTGRRPFA VVQLRTENLN KTMFNLVGCQ
TKLKYGEQDR IFRMIPGLED AEFVRYGSVH RNTYVNAPQV LNGDQSLKNR PDVFLAGQIT
GVEGYVESAA NGMWLGMMLA ARKHGENIPQ PPVECALGAL AAHLRTPVKK FQPSNINFGL
TPELNQRARK KDRKALYAER ARENFTQWYA LLPASARS
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