Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1415 |
Symbol | |
ID | 3756124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1433427 |
End bp | 1434845 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637782293 |
Product | Type I secretion outer membrane protein, TolC |
Protein accession | YP_387909 |
Protein GI | 78356460 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000596226 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTATA CGCTATCCGT TTTCCCTATA CGTTGGAATA TTATTACCAA GGGTTCTGTC ATGTCACACA CTTGTTCACC ATTCTTAAGC GCCTGCAAAA ATGCGGTGCT GCTTTCCGCA GCCGGAGTGT TTATGCTTTC CGGTCAAGCC TTTGCAGGAA CTTCTTTACA GCAAAGTGTG GAAGCCACCC TGAAAAACAA CCCTGTAATC AAATCATTCA AAGAAGGCGT GAGCGCCGCA AAACATGATG TGCGCGATGC CGAAGGCGGC TGGTTTCCCC GGCTCGACTT CAATGCAGGG TACGGCGTGG AACAGGTGAA CGATGCGCTG ACCCGCACTG ACGGCCGCAA GAACCACTGG GAAGAACGCA GCGACATAAC CACCACGCTT TCACAGCTGC TGTGGGACGG CGGCAAGGTG AACAGCCAGA TAGGCATTCA GGAAGCGCGG CTGGCAAATG CAGACAGCCG ACTGACAGAC AACGCGGAAG TACTCGCGCT GGAAGCCATC AGAGCGCACC TTGAGCTGTA CCGCCAGCGC AATCTTGTTC TGCTGGCCGA ACAGAATGTT AAAAATCATG AAGACATTCT GAAATCGCAG GAAGAGCGTC AGAGAATGGG TGCCACAAGT CTGGCTGACG TGTCGCAGAC CAAAGGACGT CTTGCCCGTG CACAGGCATC GCTCAGCAAT GCCCGGCAGG AACTGCTGGT GGCGGAAGCC AACTACAGAC GCATTGCCGG TACAGATGCT CCGGAGGTGG ACTGGGCCGA TAAACCGGCC GGTGTGCCCG GCACGTTTGA TTCCGCACTG CAGCTCGCGC TGACCAGCAA CCCCAAGCTG GCAGCCCAGC AGGCTGAAAT TCAGGAAAAT GAACAGCGCA TTCAGCTTGC ACGTTCCGAA TACTACCCCA CCTTTACCGC TCAGGCTTCC AACACCTACA AGGATCAGGT GGAAAGCAGC ACCACATGGG AAGTGGACAA CGCCCTGCAA CTGCGCGTTT CATGGAATAT TTTCCGCGGC GGATCCGATC TGGCCGCAGA AAAAGCAGAA GGTGCCCGCA AGCGCCGTTC CATGATGGAC CTGCAGAATA TCAATGAAGC CCTGATGCAG GAAACCAGCG ACACATGGAA TGCTCTGGAA AACGCCCGTG AGCAGAAGCG GCTTTTCAAC GAAGCAGTTG AATACAACAC CCAGACCCGC GACATGTATA TCGAGCAGTT CAGCGTGGGA CAGCGCAGCC TGCTGGACGT GCTGGATGCC GAAAATGAGC TCTACAGCTC TTCCATCCAG CTGGTCACAG CCACGGTAAA CGAAATCGTG GCCGAATACA GGCTGGTGGC GCTTGGCGGC AAACTGATAG AAACAGTCGG CCTCGATCCG GCCATCTACA AACAGGAAAC CGCCGAACAG AACTCCTGA
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Protein sequence | MGYTLSVFPI RWNIITKGSV MSHTCSPFLS ACKNAVLLSA AGVFMLSGQA FAGTSLQQSV EATLKNNPVI KSFKEGVSAA KHDVRDAEGG WFPRLDFNAG YGVEQVNDAL TRTDGRKNHW EERSDITTTL SQLLWDGGKV NSQIGIQEAR LANADSRLTD NAEVLALEAI RAHLELYRQR NLVLLAEQNV KNHEDILKSQ EERQRMGATS LADVSQTKGR LARAQASLSN ARQELLVAEA NYRRIAGTDA PEVDWADKPA GVPGTFDSAL QLALTSNPKL AAQQAEIQEN EQRIQLARSE YYPTFTAQAS NTYKDQVESS TTWEVDNALQ LRVSWNIFRG GSDLAAEKAE GARKRRSMMD LQNINEALMQ ETSDTWNALE NAREQKRLFN EAVEYNTQTR DMYIEQFSVG QRSLLDVLDA ENELYSSSIQ LVTATVNEIV AEYRLVALGG KLIETVGLDP AIYKQETAEQ NS
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