Gene Dde_1407 details

Gene Information

• Locus tag: Dde_1407
• ID: 3756155
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: +
• Start bp: 1424903
• End bp: 1426792
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637782285
• Product: peptidyl-prolyl cis-trans isomerse domain-containing protein
• Protein accession: YP_387901
• Protein GI: 78356452
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0760] Parvulin-like peptidyl-prolyl isomerase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00317502
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGACT CAATAAGACA GAACGCCCAG TCGTGGGGCG TTAAAATCGC CTTCGGGCTT 
ATCATCATCG TGTTTGTCTT CTGGGGCGTC GGCTCCATGG ACAATCAGCC TTCCAATGTG 
GTGGCAAAGG TGGGCAAAAC GTCCATCACC GTCAATGCCT TTGCCAGAGA ATATGAACAG 
CAGGTCGAGC TTGTCCGTGC TCAGTTTCCG GACGTGACCT CGGAAGATCT GAAGCAGGCG 
GGGCTGAAAA TGCGCGTTCT GAATCAGATG ATTTCCGAAG TGCTGCTTGT GCAGCAGGCC 
GAAAAGCAGG GGCTGGAGGT TTCTCCCGCC GAACTGAAGC TGCGTATCGC CGAGATTCCC 
GTGTTCAACG ATGCCGATGG CAACTTTGAC GGTGAGCGTT ACAAACAGGT GCTGGCTGCA 
CAGGGTACCA CACCCGGCGC GTACGAAGAC AAGATCCGTC GTTCCATGCT GGCGCAGAAA 
ATGCGTGATT TCATCACCAT GCCTGCCGCC GTCACCGCAG AAGAAGCCAA AGCCATGTTC 
CTGTATTCTG CAGAACGCAG AAGCATGGAT TATGTGCTTT TTGCCGCGGA AAACTATCTG 
GATCAGGTGA AGCCCGGCGA AGAGCAGATT TCCGCTTTTT ACAAGCAGAA TATTGAAAAT 
TATAAAGTGC CCCCGCGCGT GACGCTGCAG TACGTGATGA TCACTCCTGC GGCACTGGCC 
GACGGCGCTT CTGTCTCTGA TGACCGCATA GCTGCCTATT ACGAAGACAA TAAAGAATCA 
TTCCGTCAGG AAGAACGGGT GCACGCCCGT CACATTCTGG TTCTGGCAGA TGCCGGTGCG 
TCGGAAGAAA AGGTGGCCGC GGCTGAGAAA AAGATAAACG AATTGTATGA GCGGATCCGC 
AAGGGTGCTG ATTTTGCCAA GGTGGCCAAA GAAGCCTCTG AAGGGCCCAG TGCTCCGCTT 
GGCGGCGATC TGGGCTGGTT CGGTCGCGGA CAGATGGTAC CTGAGTTTGA GCAGGCAGCC 
TTTGCCGCTG CCGCCGGGCA GGTAACCGCA CCTGTGCGCA CGCAGTTCGG TTTCCACATC 
ATTAAAGTGG AAGAAAAAGA AAACGCCCGT ATCCGCACGC TGGACGAAGT GCATGATGAG 
ATTTCGCACC GTCTGGCCGA AGAGGCGGCG CTGGAAAAGG TTACTCCCAC TCTGGACGCC 
GCACTGGAAG CACTGCTTGC CGGTGAAGAC CTGCCTGCCG TGGCGGAGCG CATGCACCTT 
TCCCTGCGTG ACAGCGGTCA GTTCACCCGC GCTCAGGCCA CCGGCCTGCT TGGTGTTGAA 
CCTGCATCTG TCGAGCTTAT TTTCACCACG CCCGAAGGGT CTGTCATTGA CACGCCCATG 
GAAGTGGAAG GTGGCTACAT GCTGGCCAAG GTTGTTTCCA GCAAGGAAGA AACCTACCGC 
GAGCTGGACG TTGTGAAGGC GGACGTCATC GCCCGTCTGA AGCAGCAGGA AGCCATGAAG 
CTGGCCGCTG ATGCTGCGCG CGAAGCCGTA GCAGCGCTGA AGAACGACGG TTCTCTGCCG 
CAGTCTGCAG CAGCCCGTGT GAAGAGAAGC GAACCTTTCG GCCGTCAGGG CTTTATTCCC 
GGTGTGGGAC AGGCTCCTGA TGTGACTTCC GCCATATTCA AGGCTGCCGA TGACGCATGG 
ATAGCTGAAG CGTTTCAGAC TCCCACCGGT GCTGTTGTGG CTAAGCGCGC CGCTGTGCTT 
ACCCCCGATG AAACTCAGTG GGCGCAGGTT AAAGACCGTT TTGTTGACGC CATGCTGCAG 
AGCAAGCGCG AAGAGCTGTA CCGTGCCTAC ATGCAGGACC TGCTTACCAA AACAAAGGTT 
GAGCTGGTGA ACAACAAGAT TCTTGAGTAA 

 

Protein sequence

MLDSIRQNAQ SWGVKIAFGL IIIVFVFWGV GSMDNQPSNV VAKVGKTSIT VNAFAREYEQ 
QVELVRAQFP DVTSEDLKQA GLKMRVLNQM ISEVLLVQQA EKQGLEVSPA ELKLRIAEIP 
VFNDADGNFD GERYKQVLAA QGTTPGAYED KIRRSMLAQK MRDFITMPAA VTAEEAKAMF 
LYSAERRSMD YVLFAAENYL DQVKPGEEQI SAFYKQNIEN YKVPPRVTLQ YVMITPAALA 
DGASVSDDRI AAYYEDNKES FRQEERVHAR HILVLADAGA SEEKVAAAEK KINELYERIR 
KGADFAKVAK EASEGPSAPL GGDLGWFGRG QMVPEFEQAA FAAAAGQVTA PVRTQFGFHI 
IKVEEKENAR IRTLDEVHDE ISHRLAEEAA LEKVTPTLDA ALEALLAGED LPAVAERMHL 
SLRDSGQFTR AQATGLLGVE PASVELIFTT PEGSVIDTPM EVEGGYMLAK VVSSKEETYR 
ELDVVKADVI ARLKQQEAMK LAADAAREAV AALKNDGSLP QSAAARVKRS EPFGRQGFIP 
GVGQAPDVTS AIFKAADDAW IAEAFQTPTG AVVAKRAAVL TPDETQWAQV KDRFVDAMLQ 
SKREELYRAY MQDLLTKTKV ELVNNKILE