| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1392 |
|---|
| Symbol | |
|---|
| ID | 3756140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 1409846 |
|---|
| End bp | 1410703 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637782270 |
|---|
| Product | 4-hydroxybenzoate octaprenyltransferase |
|---|
| Protein accession | YP_387886 |
|---|
| Protein GI | 78356437 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.230363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTGT TCGGCAGATT CGGCGCGGTG TGCCGCATGG TTAAAATTGA ACATTCCGTA
TTTGCACTGC CTTTCGCCTA TACCGGCGCA TTTATCGCCG CAGGCGGCTG GCCCGGTTGG
TATACCATGG TGGTGCTTAC CGCGGCCATG GTGGCTGTGC GCTCTTTTGC CATGGCTTTC
AACAGGCTGA TAGACCTGCC CGTAGACCGC GCCAACCCCC GTACGCAGGG ACGGCCGCTG
GTAACGGGTG AGATAACCCC CGCGCAGACA TGGGCCTTTA TCGGTGTCAT GGCTGCAGTG
TTTGTTGCCG CGTGCGCGGC CATGAACCCG CTGTGTCTCA AGCTGGCACC TGTGGCTTTG
TTCATGTCCG CGGTGTACAG CCTGTTCAAA CGGTTCACAT GGGCCTGTCA TTTCTTTCTC
GGCGCGGTGC TGGGGTTGGC TCCCATTGCC GGATATATTG CCGTGACGCC TGAATTCACC
GTCCCTGTCA TTCTTTTCTT CTGGGGCGTG CTGTTCTGGG TGGCCGGTTT TGACATTTTG
TATTCGTGTC AGGATGAAGA CTTTGACAGA AGAGAGGGGC TGCATTCCGT ACCGGCCAGA
GTAGGCGTGC GTTCGGCGCT TATCGTTTCT TCTTTCTGTC ATGTGAACAC CTCTGTTTTC
TTTCTTATGG CCGGATGGGC TGCAGGGCTT TCGTGGCCTT TTTTCGCGGT GTGGGGGCTT
GTCAGTCTTA TTCTGCTGGC CGAGCATAAG ATAATCTCGG CAGAAGACAT GAGCCGGGTT
AATATGGCAT TCTTCACCAT GAACGGTGTT GTCTCGGTGG TTGTGTTTGC CGGAGTGCTG
CTGGGCATAT ACATGTAG
|
|---|
| Protein sequence | MTVFGRFGAV CRMVKIEHSV FALPFAYTGA FIAAGGWPGW YTMVVLTAAM VAVRSFAMAF
NRLIDLPVDR ANPRTQGRPL VTGEITPAQT WAFIGVMAAV FVAACAAMNP LCLKLAPVAL
FMSAVYSLFK RFTWACHFFL GAVLGLAPIA GYIAVTPEFT VPVILFFWGV LFWVAGFDIL
YSCQDEDFDR REGLHSVPAR VGVRSALIVS SFCHVNTSVF FLMAGWAAGL SWPFFAVWGL
VSLILLAEHK IISAEDMSRV NMAFFTMNGV VSVVVFAGVL LGIYM
|
|---|
| |