| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1385 |
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| Symbol | |
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| ID | 3756172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1403381 |
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| End bp | 1404196 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637782263 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_387879 |
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| Protein GI | 78356430 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00529871 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTG TTAAGGCGCT TGTCCTGCTG CTGGTTACTG TTATGGCGGT ACCGGCTTTT
GCAGGCGACA TCGATCTGGC CAAAAAATCC GTTCTGAACG ACATCCTGAA GCGCGGAGAA
CTGCGCGTCG GCTTCGACGC CGGTTATCCC CCCTTTGAGA TGACGGACAA GTCCGGCAAT
TTTGTGGGCT TTGACATTGA CCTCGGCAAA GAGCTTGCCA AATCCATGGG TGTTAAGTTC
GTTCCTGTGA ATACCGATTT CGACGGTATG ATTCCTTCGC TGCTTTCCGG AAAGTTTGAC
GTGATCATTT CCGGCATGAC ACTGACGCAG GAACGCAACA TGAAGATCGG TTTTTCCGAA
CCGTACCTTG TCATGGGGCA GACCGTGCTG GTAGCTGCAA AGCATAAAGG CACCGTGAAA
TCCTACAAGG ATCTCAATGA TCCCAAGTTC ATCGTTGTTT CCCGCATGGG TACCACCGGT
GAAGAAGCCA CCAAAAAATA CCTGCCCAAG GCGACCTACA AGTCGTTTGA CAAAGAAGTG
GACTGCGCCA TGGAAGTGGT GAACGGCCGT GCCGACGCGT TTGTGTACGA CCTGCCGGTG
AACGAGGTGT TTCAGGCACA GCAGGGCAAG GACAAAACCT ACCTGCTGAA CGAGCCTTTC
ACCTTTGAAC CCATGGCTGT GGGCTACAAG CAGGGTGATC CTGACTTTGC AAACTTTATC
AATCATTTTC TGCGTCAGCT GAAAAACGAC GGCCGCTACG AGCGCATGTA CAACAAGTGG
CTGCGTTCCG ACGCATGGCA GTCTCAGCTT AAATAA
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| Protein sequence | MKFVKALVLL LVTVMAVPAF AGDIDLAKKS VLNDILKRGE LRVGFDAGYP PFEMTDKSGN
FVGFDIDLGK ELAKSMGVKF VPVNTDFDGM IPSLLSGKFD VIISGMTLTQ ERNMKIGFSE
PYLVMGQTVL VAAKHKGTVK SYKDLNDPKF IVVSRMGTTG EEATKKYLPK ATYKSFDKEV
DCAMEVVNGR ADAFVYDLPV NEVFQAQQGK DKTYLLNEPF TFEPMAVGYK QGDPDFANFI
NHFLRQLKND GRYERMYNKW LRSDAWQSQL K
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