Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1379 |
Symbol | thiE |
ID | 3756166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1397914 |
End bp | 1398561 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637782257 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_387873 |
Protein GI | 78356424 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000146383 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCGG ATTATTCGGT TTATCTGGTC ACTGACCGTA CGCTGTGTGT CAGTGGTACG CTGGAAGATG TGGTGGCCCG TGCCGTGCAG GGCGGCGTTA CCATGGTGCA GCTGCGCGAA AAGCAGCTTT GTACCCGTGA GTTTGTCGAA CTTGGCAGGG CGCTGCGGGC GCTGCTGGCC CCCCGCGGGG TTCCGCTGCT TGTCAACGAC CGGGTGGATG TGGCTCTGGC CTGCGGGGCC GACGGGGTGC ATATCGGGCA GAGCGATATC CGTTATGCTG ATGCACGCAG GCTCATGGGG GCCGGTGCCG TCATCGGCGT GTCGGTGGAA TCCGTTGAAC AGGCTGCGGA AGCGGAACGT TGCGGCGCCG ACTATATGGG CGTGAGCCCC GTATTTGCCA CCCCCACAAA AACAGACACT TCCGCGCCGT GGGGGCTGGA AGGGCTGCGC GGTCTGCGGC GGCGGTTTTC TTTGCCGCTG GTGGCCATAG GCGGTATCGG TCCGGATAAT GCGGCTGAGG TTTTTGAAGC GGGAGCAGAC GGCATTGCTG TTGTTTCTGC CATTTGCGCC AGTCCGGACC CGCAGCAGGC GGCAGCAACA CTGCGTGCCG TTGCCCGCGG AAAAAGGCGT GCGGCAGCCG TTTTATGA
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Protein sequence | MQPDYSVYLV TDRTLCVSGT LEDVVARAVQ GGVTMVQLRE KQLCTREFVE LGRALRALLA PRGVPLLVND RVDVALACGA DGVHIGQSDI RYADARRLMG AGAVIGVSVE SVEQAAEAER CGADYMGVSP VFATPTKTDT SAPWGLEGLR GLRRRFSLPL VAIGGIGPDN AAEVFEAGAD GIAVVSAICA SPDPQQAAAT LRAVARGKRR AAAVL
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