| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1370 |
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| Symbol | |
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| ID | 3756157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1389828 |
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| End bp | 1391642 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637782250 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_387866 |
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| Protein GI | 78356417 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00690488 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATGC ATCTCAGATT TTCATCACGC CTGCTGTGGC TCTGGCTGGT CATTGCGGTG
TCTTTGGCGT GCCTTCCCGC TCCTGCGGGT GCCGCTTCGC TTGATGCCTC GTTCAACAGC
GCATGGCGCC AGTTTCATTC GCTCACCAAA GACGCCCGCA AAGGGAAATA CCGTGACAAC
TGGTTGCGCA TAGAACAGGA TTTCATGGAT GTGTACAAGC GGAGTCCGCG CGGCCCTCTT
GCACCCAAAT CACTGTACTA CGCAGGGCGA GTGCGCTCCG AACTGGGGGC CCGCTCATAT
CTCGCTTCTG ACTACAGGCG TGCTGTGGAG TATTTCCAGC GCCTTGCCAA CCGCTTTCCA
TCACATTCCT GGACAGATGA CGCGCTGTAC CGCGCCGCCG CCATATACAA GGACAGGCTG
GGTGATCATG GTACGGCCAG AAGCCTGCTG AACACCATTC TGCGCGACCA TCAGCAGGGC
GACATGTACT ACAAGGCCAT AGCATTGCAT CGCTCTCTGG ACGGAGGCAG CGGCGCTGCC
GGAGCCCCTT CCGCCTCTTC TGCGCCTGCG CCTGCTCCGG AGCCCGCGCC GGCTCCTGCA
CGCTCCGCTG CAGCTGATGA ACCCCTGAAG GCTTCTGAAA TAATCAAAGG GGGCACCGCC
AACAGCGGCG CTCCGGCCAC TCTGGTTGAC GTGCGCTACC AGTCCAGTGA TGATTACACC
CGTGTGGTGC TTGAATGCAG CAAGGAAGTC GCTTACCGGT ATCAGTTTCT GCCTGAAGAC
AAAAAGGCCT CCAAGCCGTT CCGTCTGTAT GTCGATCTGG AAAATGCATC GCACGGCAAA
CTGGTGCGGG CAAAGGAGAC CGTTGCGGAC GGTATTCTGC GGGAGGTGCG CACAGGTACG
CCGCGCCCCG GTGTGAGCAG GGTGGTTCTC GATTTTTCAT CTGTCCGTAA ATACAATGTC
TTTACGCTGG ATAACCCGTT CCGGGTGGTC ATCGATGTCA CTTCTCCGGA AGAAAAGGCG
CAGACTGCCG TAGCCGGTGC ACCCGCCAGC CGGCCCAGAC CGGCAACCCC CTACAAGGTG
CCTTCGGGCA GCAAAGAACA GGTTAAAGAC CTTGTGGAAC AGCTGGGGCT GACGCTTGAT
ACCATCATGA TAGATGCAGG GCACGGCGGC AAGGACCCCG GCACGCAGCA TAACGGTATA
CGCGAACGGG ACTATACGCT TAAGATGGCC AAAATAATTG GCGAAAAGCT TAAGAAAAAA
GGCTTCAACG TGGTGTACAC CCGCACAAAA GATGTGTTTG TGCCCCTTGA AGAACGCACG
GCCATGGCCA ACGTTAAAAA AGCAGACCTT TTTCTTTCCG TGCACATCAA CGCCAACAGA
AGTTCAAAAA TCCACGGATT TGAGACCTAC TATCTGAACC TTGCCCGCTC TGCCAGCGCC
GTGCGTGTGG CCGCGCGTGA AAACGCCGTC AGCGAAAAGC GCATCAGCGA TTTGCAGTTC
ATTCTCACTG ACCTTATGCT CAATTCAAAA ATGCAGGAAT CAAAAGATCT TGCAGAACTG
ATACAGAGTA ATGTCATCGG CACGGTAAAA GGTAAGTACG GTTACCCCAC GCGTGACAAC
GGAGTCCGCT CGGCGCCGTT TTATGTGCTT ATGGGCGCAA AAATGCCTTC TGTTCTTATG
GAACTGGGCT ACTGCACCAA CGATGCAGAA GCCCGTAGGC TCAAGTCTGA CAACTACCTT
AACCGTATGG CGGACGGCAT TGTGGCGGGC GTGGTGGCGT ACAAAAAGAA AATCAACAGG
TATGCATCCA TGTGA
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| Protein sequence | MPMHLRFSSR LLWLWLVIAV SLACLPAPAG AASLDASFNS AWRQFHSLTK DARKGKYRDN
WLRIEQDFMD VYKRSPRGPL APKSLYYAGR VRSELGARSY LASDYRRAVE YFQRLANRFP
SHSWTDDALY RAAAIYKDRL GDHGTARSLL NTILRDHQQG DMYYKAIALH RSLDGGSGAA
GAPSASSAPA PAPEPAPAPA RSAAADEPLK ASEIIKGGTA NSGAPATLVD VRYQSSDDYT
RVVLECSKEV AYRYQFLPED KKASKPFRLY VDLENASHGK LVRAKETVAD GILREVRTGT
PRPGVSRVVL DFSSVRKYNV FTLDNPFRVV IDVTSPEEKA QTAVAGAPAS RPRPATPYKV
PSGSKEQVKD LVEQLGLTLD TIMIDAGHGG KDPGTQHNGI RERDYTLKMA KIIGEKLKKK
GFNVVYTRTK DVFVPLEERT AMANVKKADL FLSVHINANR SSKIHGFETY YLNLARSASA
VRVAARENAV SEKRISDLQF ILTDLMLNSK MQESKDLAEL IQSNVIGTVK GKYGYPTRDN
GVRSAPFYVL MGAKMPSVLM ELGYCTNDAE ARRLKSDNYL NRMADGIVAG VVAYKKKINR
YASM
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