| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1351 |
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| Symbol | |
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| ID | 3756210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1366823 |
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| End bp | 1369537 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637782229 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_387847 |
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| Protein GI | 78356398 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0180215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCTTTG ACGCATCGCA TTCCGGCTTT TCCAGAAAGT CATTGCCGCG TTTCGCGTTG
TGGTTTGCAG CCGCTTCATG CGTGGTCATG GCCATTGCCG TGGTGGTTTC GCATCGGGTG
GCCACGCAGG CACTGCAACG CCACGAGGGC CTTTTTTCGC GCCAGCAACT GCGTATGACC
CTGCTGTCCG CACAGGCCAT GCAGGGATAT TTTTCTTCAG TTGCCGGCCA TCTGCGCATT
GCCCGGCCTC CCGCCCCTGT GCCGGATGAG GCTCTGTTCA CTGCTCCTTC CGGCTCTCTC
AGTCATCTTT TCGACAAACA CCCTTCACTT GTGGCTGTGT GTTTCGGCAC GCAGACCGGC
GCCGATGCCG GTATATTCGT TATCCGGCCT CAGGCTTCCG CCGCATTGCG CGGTCAGGCA
CGTCTGTGGC TTCGGCAGGC GGTGCTGCAT CCTGTCCGGT GCCCGCCGCC CGACGGCTGG
TGGTTTGCCC CTGTGTTTGT AGAGCACAAG TCTGTGGTTG CCGTGCAGGT ATGCACAGCG
GATGCGGCGC AGGCTCCTGT GGTGGCTGTT TTTGACATGC ACGGACTGGC GTTGCGCTAT
GCGGGGCAGC TGGGCATAGG GGACAGCGGT TCGGGTTTTG TGCTGGATGA ACGGGGTACG
GTCCTTTTTC ATGCCGGTTC TCCTGTGGCG GGCCGCAATG TGTTTGACGG TATGCATGCC
GGTTTTCCCG CGTTGGAACA GCTTGATTCC CGCATGGTGC AGGAGCCTTC CGGCGCGGGC
GGCTATGAAT ACGCTACCCG TCGCAGCGGG GGAACGGTGC GTAAAATGGT GGCCTGGAAC
ACTGTGGAAC TGCCACCGCA CCGGCTTGTA GTGGGACTGG CCGCCGCCGT GCAGGACATC
AACGCCGACA TGTACGCACT GAACCGTCAG CAGGGATTGC TGGCGGTTAC GGCGTTTTTG
TTTTTTGCCC TGATGGCGCT GGGGTTTCTG CGTGAACAGC GCACACGGGC GTTGCGTCGG
TCTGCCGAAC TGTACCGGCA GCTGGCCGAT ACAGCCTACG ACATTGAGCT GTGGCATGAT
GCGGAAGGAA AGCTTTTGTA TGTTTCTCCT TCCTGCGAAC GCATTACGGG ATATCCCGCT
GCCGATTTTA TGGCCGATGC CGGACTGCTG GAACGAGTGG TGCACCGCGA AGACCTGCCG
GCTTTCAGAA TGCACATGAG TGCGCCCGGT ATGCTGGAAG GCGAATCGCT GGAGTATCGT
CTGTTACACC GGACGGGCAA AGTACGCTGG GTTTCTGTCG TTGCCCGTGA AATATGGACA
TCGGACGGAA TCTGTCAGGG GGTGCGTTCT TCCGTGCGTG ACGTGACGGA AAGCAAGCTG
ATGGAAAAGG AGCTGGATTA CAAATCGCAG CATGATGAGC TGACAGGGGT TGCCAACAGA
TCGCTGTGTC TGGCGCGCAT CCGCAAAGCC ATGGTGCGTA CGGCTCCCAG ACCGGAGGTA
GGGTTTGCCG TCCTTTTTCT TGATATCGAC CGCTTCAAGA TTATCAACGA CAGTCTGGGG
CACGAACAGG GCGATATGGT GCTGGCTGAA ATGGCCGAAC GTCTGGTGGC GTCGGTCCGG
CCCTGTGATA CTGTGGCCCG TTTCGGCGGT GACGAGTTTG TCATTGTGCT GGAAGAGTTG
CCCGGTCCGC GTGAAGCTGT GCGCATGGCG CGGCTGATCA AAAAGCGTTT CAAGGAGCCT
TTGCTTCTTG AAGGCCATGA AATGCGCATA ACATGCAGTA TCGGAATGAT TTTTGAGTAC
GGCGGCGACA GCGTCGGCGC TCAGGCTGCT GTGCGCAATG CCAATATTGC CATGTACCGC
GCCAAGGCTG CGGGCCGTGA CAAGCTGAAA GTCTTCCGGC CCAAGATGCT TGCCGCCGCT
GCCAGCGTGA TGACTCTGGA AAATGATATG CGTTCGGGGC TGCAGCGCGA TGAATTTTTT
ATGGAATACC AGCCGGTGCA GCGTTCCGAT GACGGAACTC TGACCGGATT CGAGGCACTG
ATCCGCTGGC GGCATCCCGA AAAAGGTATC ATAGGACCGG ATCATTTTAT TCCGCTGGCC
GAGGAAAGCG GTCTTATTGT GGATATCGGG CTGAGCGCGC TGCGCAAATC ATGCTGCGAA
ATGGCCCGCT GGTGCAGGCG CTACCCCGGC TGCGAAGAAC TGTTTCTGGC GGTGAACCTT
TCTGCGCGGC AGTTTTCTCA GCCCGACCTT GTGACCTGTG TAAGCGGTAT ATTGCAGGAT
TCGGGCCTCG ACCCCCGTCA GCTCAAGCTG GAAATTACAG AATCCACCAT CATGTCAAAC
GCGGAAACGG CTCTGGCCAT GATGCACCGG CTGAAGCAGA TCGGTGTACA GCTGGCTATC
GACGATTTCG GCACAGGATA TTCTTCACTG GCGTATCTGC AGAAGCTGCC TGTGGATACC
CTGAAGGTGG ACAGAATGTT TGTGAGCGCC ATGGAAGAAC AGGCCGGATG CCTTGAAATA
GTGCGCAGTA TTATCGTGCT GGCCAACAGC CTGCAGTTGA ATACCGTGGC GGAAGGCGTG
GAAAACAGCA GACAGCTGGA GATGCTGCGT AATCTCGGCT GCTCCTACGT TCAGGGGTTT
TATTTTCATA AACCGCTGCC GGTGGCCGCT GCGGAACTGT TGCTGAACGG CAGAGAACCG
GCGGAAGCCG TCTGA
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| Protein sequence | MFFDASHSGF SRKSLPRFAL WFAAASCVVM AIAVVVSHRV ATQALQRHEG LFSRQQLRMT
LLSAQAMQGY FSSVAGHLRI ARPPAPVPDE ALFTAPSGSL SHLFDKHPSL VAVCFGTQTG
ADAGIFVIRP QASAALRGQA RLWLRQAVLH PVRCPPPDGW WFAPVFVEHK SVVAVQVCTA
DAAQAPVVAV FDMHGLALRY AGQLGIGDSG SGFVLDERGT VLFHAGSPVA GRNVFDGMHA
GFPALEQLDS RMVQEPSGAG GYEYATRRSG GTVRKMVAWN TVELPPHRLV VGLAAAVQDI
NADMYALNRQ QGLLAVTAFL FFALMALGFL REQRTRALRR SAELYRQLAD TAYDIELWHD
AEGKLLYVSP SCERITGYPA ADFMADAGLL ERVVHREDLP AFRMHMSAPG MLEGESLEYR
LLHRTGKVRW VSVVAREIWT SDGICQGVRS SVRDVTESKL MEKELDYKSQ HDELTGVANR
SLCLARIRKA MVRTAPRPEV GFAVLFLDID RFKIINDSLG HEQGDMVLAE MAERLVASVR
PCDTVARFGG DEFVIVLEEL PGPREAVRMA RLIKKRFKEP LLLEGHEMRI TCSIGMIFEY
GGDSVGAQAA VRNANIAMYR AKAAGRDKLK VFRPKMLAAA ASVMTLENDM RSGLQRDEFF
MEYQPVQRSD DGTLTGFEAL IRWRHPEKGI IGPDHFIPLA EESGLIVDIG LSALRKSCCE
MARWCRRYPG CEELFLAVNL SARQFSQPDL VTCVSGILQD SGLDPRQLKL EITESTIMSN
AETALAMMHR LKQIGVQLAI DDFGTGYSSL AYLQKLPVDT LKVDRMFVSA MEEQAGCLEI
VRSIIVLANS LQLNTVAEGV ENSRQLEMLR NLGCSYVQGF YFHKPLPVAA AELLLNGREP
AEAV
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