Gene Dde_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1317 
Symbol 
ID3756215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp1335993 
End bp1336619 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content58% 
IMG OID637782195 
Producthypothetical protein 
Protein accessionYP_387813 
Protein GI78356364 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000207664 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGC GCTATCCTGT GCCCGCGGTG GCAGTGCATA CCGTGCAGGA CACCATTAAA 
CGCAGTCTGT TTATTGCCTA TCTGGCCCAT GCCCCGTGTC CGGATTCGGC CAGAGAGTTC 
ATTGACAGCA TCCGCACCCG CCATGCCGAT GCCACCCACA ACTGCTGGGC TTTCATGTGC 
GGCGCGCCGG GTGACACCGC CCGCGTGGGC ATGAGCGACG ACGGAGAACC TCACGGCACT 
GCAGGACGCC CCATGCTCAA TGTGCTGCTG CATGGCGGCG TGGGAGAAAT CGCCGTGGTG 
GTCACGCGGT ACTTCGGCGG TACCAAACTG GGCACAGGGG GGCTGGTACG CGCATACGGG 
GGCATGGTTT CGCTGGGACT GGAAAGCCTG CCCGTGCGTG AAAAAATTTT TCCCGCCCAT 
CTGAATATAA TTATGGAATA CACTCATGTG ACCGTTTTTA AACGGTTGAT TGAAGAACAC 
GAGGCCGTAG TGACGCACGA AGAATACGCC GCTGATGCAG GTTTTACCAT AACCCTGCCG 
CAGGAGAACG TAGCCGCTCT GCGACAGGCA CTGACAGAGC TCACCAACGG CACAGTGCTT 
ATAGAAAAAG CCGGAGAGCC GGCCTGA
 
Protein sequence
MNQRYPVPAV AVHTVQDTIK RSLFIAYLAH APCPDSAREF IDSIRTRHAD ATHNCWAFMC 
GAPGDTARVG MSDDGEPHGT AGRPMLNVLL HGGVGEIAVV VTRYFGGTKL GTGGLVRAYG 
GMVSLGLESL PVREKIFPAH LNIIMEYTHV TVFKRLIEEH EAVVTHEEYA ADAGFTITLP 
QENVAALRQA LTELTNGTVL IEKAGEPA