Gene Dde_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1309 
Symbol 
ID3755056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp1327836 
End bp1328717 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content57% 
IMG OID637782187 
ProductTPR domain-containing protein 
Protein accessionYP_387805 
Protein GI78356356 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000314347 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTGGC TGCGTGCGGG ATGCGGCGGG CCGCTGTCCG GCCGTATGGC CGCGCATATC 
AGCTTAATTT GCAATACCAA GGATCATACC GTGAGGCTAG ACAGGTATCT GGGTGTATAT 
TCAACTGTGG AAAGCGCGCC TTTTTCCGCC GGAAGGCCCG GAAAACCTTC GTCACGCAAG 
CGTTACTGGA GTGTCTGGGC AAAAGACGGT GAAGAGGTGC TTGTGCAGCC GCTTACCGGC 
AGCCTTGACC CCGGCGGTGA CATACGGCCT GTGCCCCGCG CCGAACTGGA AAGCCGCTTT 
ATGCACGAAC CGGGGCTGAC GGCCCTGTTG CCGGCAGAAC CCGATGCAGC AGCCGGCGGT 
CAGCTGAAAA TTGAACTGGA AGGCGATGAC CCTTTCTACG CGTCAGATGC CGCCGCCGGA 
GAGGATTACC GTCAGGAGGA TGAACGGCCG GCACGGCTTG ATCTTGACGA GCTGACGCTG 
GAAGAGGCCG AAGAAACAGA GCATGCCGCC CGCACCGACT TTGCCTTTGC CCTTACCTAT 
CTGCGCAGGG GCGAAACAGA CAGGGCCAGA GCGCTGTTTG AAAGTCTGGC CGCGCCGGAT 
GCGCGTTATC AGCCCGGACA CCGGCATATG TTTACCGATT TCGGCATAAG TCTGCGCAAA 
AGCGGTCTGC CGGAGGTGGC GCTGATGCAC CACAAAAGGG CATTGCAGCT CAGTCCGTCC 
GACGACCATA TTCATTTCAA TATTGCCAGA GTCTGTTTTG ATATGGGAAA TATGCGCGAT 
GCGTTGCATC ATCTTGAGGC ATCGCTTGCG ATGAATCCGC AGCTTGAAGC GTCGAAGCGC 
TTCAAAGAGT ATATTCTTAA CCATGAGAAA CATGGCCGCT AG
 
Protein sequence
MLWLRAGCGG PLSGRMAAHI SLICNTKDHT VRLDRYLGVY STVESAPFSA GRPGKPSSRK 
RYWSVWAKDG EEVLVQPLTG SLDPGGDIRP VPRAELESRF MHEPGLTALL PAEPDAAAGG 
QLKIELEGDD PFYASDAAAG EDYRQEDERP ARLDLDELTL EEAEETEHAA RTDFAFALTY 
LRRGETDRAR ALFESLAAPD ARYQPGHRHM FTDFGISLRK SGLPEVALMH HKRALQLSPS 
DDHIHFNIAR VCFDMGNMRD ALHHLEASLA MNPQLEASKR FKEYILNHEK HGR