Gene Dde_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1288 
Symbol 
ID3755022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp1306863 
End bp1307486 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content57% 
IMG OID637782159 
ProductTPR repeat-containing protein 
Protein accessionYP_387784 
Protein GI78356335 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTAA GCAAACAGGA ACTCAGGGAA ATTGCGGCGC TTGTTGAAAA AGGCGCCTAT 
GTGAAACGCT CCACCCTGTA TGTCGCCGTC GGGGTTGCCT TGCTGGCAGG GCTGTACGCA 
GGCAACCTGC TGACAACCGT GTTCACCCAC TCACAACAGG CCGCAGTACA TCAACAGGCC 
CCCGCCCAGC AGGTACCGCC TCAGCAGACG GGGCAGATAC TCGACCTTGA GGAATATGTT 
CAGAAACATC CCGAAGAGCA TGCCGCATGG GTCAAACTGG GCCACCTGTA TTTTGACACA 
AACCAGCCAC GCCCCGCCAT ACGGGCATAC GAAAAGGCAT TGCAGATCAA ACCCGGTGAT 
GCTGATGTGC TGACCGATCT GGGAGTAATG TACCGCAGAG ACCACCAGCA CCGCCGTGCC 
GTTGAAACCT TTGACCAAGC CATCGCTGCT GATCCGTCCC ACGAGGTTTC GCGGTTCAAC 
AAGGGCATTG TTCTGTACCA TGACCTGAAC AGAAAAGAAG AAGCATTTGC CGCGTGGCAA 
GAGCTGCTGC GCCTGAATCC CGAAGCCCGC ACACCGGGCG GTACACCGGT ACGGGATATG 
CTGCGCCAGC TGCAGGGCCA GTAA
 
Protein sequence
MALSKQELRE IAALVEKGAY VKRSTLYVAV GVALLAGLYA GNLLTTVFTH SQQAAVHQQA 
PAQQVPPQQT GQILDLEEYV QKHPEEHAAW VKLGHLYFDT NQPRPAIRAY EKALQIKPGD 
ADVLTDLGVM YRRDHQHRRA VETFDQAIAA DPSHEVSRFN KGIVLYHDLN RKEEAFAAWQ 
ELLRLNPEAR TPGGTPVRDM LRQLQGQ