Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1270 |
Symbol | |
ID | 3755259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1286947 |
End bp | 1288341 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637782141 |
Product | Fis family transcriptional regulator |
Protein accession | YP_387766 |
Protein GI | 78356317 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.912527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAG TAATACAACA TATAGAAAGC ATATTTGATG TATTAAGTGA CGGGATATAC ATTACAGACA AATCCGGAAA GACCCTGTTC GTCAACAAAC GGTACGAACA GCTTACCGGC CTGCAGATGA AAGACATCAA GGGACTGAAT GTCAGCACCC TGCTGGAAGA AGGTGTCTTT GACATCATTC TGAACCCAGA AATAGTCCGC ACACGCCGCC CGGCCACATC CGTGCAGAAT GTCCGGCAGA GCAAAAAGGT CATCCTGCGC GGCTATCCTG TGTTTGACGA TGAAGGTGAA GTCTGTCTTG TGGTCACATT CGCACGCGAC ATCACCATGA TAACCCAGTT CCGCGACCAG ATAGCCCAGC AGCGCGAGCT GATAGACTCG TTCAACGAGC GCATGGAACA CATGGCGCAG GAGCAGACCC GCCACCCGCG CCCCGTATTT GAAAGTCATG CCATGAAACG GGTTCTGGAA CTGCTGCAGC GCGTGGCTTC CACCGATGCC ACCATGCTTA TTCTGGGTGA AACAGGGGTG GGCAAAGATG TGATTGCCCG TCTTGCCCAT GAATACAGTC CCCGCGACGG CAAGCTGTTC ATGAAGGTGG ACTGCGGCAG CATAGCTGAA AATCTTATAG AATCTGAATT GTTCGGCTAT GTTCCGGGTG CGTTTTCCGG AGCAAGCAGC AAAGGGAAAC CGGGTTACTT TGAAATAGCC GACGGCGGTA CAGTTTTTCT GGACGAAATA GGCGAGCTGC CGCTGCCCAT GCAGGCAAAG CTGTTGCGCG TGCTGCAGGA CAGAGAGGTC ATGCGCGTGG GCGCCACGCA GCCCAAAGAG GTCAATGTGC GCATCATCGC CGCCACCAAC CGCAATCTGG CAAAAGAGGT GGAAGAAGGG CGGTTCCGCA GCGATCTTTT TTACCGCCTG AATGTGGCCG TGCTGCGGCT GCCGCCGCTG CGCGAACGCA GCGACGACAT TCTTCCGCTG GCAGACACGT TTCTTGACCG GTTCAATGCC AAATACCACC GCACCATGAC CATGACCAGA GCCACTCGCC ACGCTCTGGG CAACTACGGC TGGCCGGGCA ATGTGCGTGA GATGCAGAAT CTTATCCAGA GCCTTGTGGT CACATGCGAC GGGCGCTCTA TCCGCCCCGA GCATCTGCCG CCGCATATCA CCCGCGCAGG CAAAAGCACC CCCTACACGC CCCCCGCCCC CGAAGACGAG CGCCCGCTGA AGGAAATCAT GGCCGACATC GAACGGGAAA TTCTGCAGGA AGCCCTCAAA CGTCACGGCT CGGTATGCAA GGTGGCATCC ATGTACAAAA TAAGCAGGAC CACCCTGTTC AGAAAATTAC GTGACGTACA GGACGGCACG CACGAAGACG CCTGA
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Protein sequence | MRKVIQHIES IFDVLSDGIY ITDKSGKTLF VNKRYEQLTG LQMKDIKGLN VSTLLEEGVF DIILNPEIVR TRRPATSVQN VRQSKKVILR GYPVFDDEGE VCLVVTFARD ITMITQFRDQ IAQQRELIDS FNERMEHMAQ EQTRHPRPVF ESHAMKRVLE LLQRVASTDA TMLILGETGV GKDVIARLAH EYSPRDGKLF MKVDCGSIAE NLIESELFGY VPGAFSGASS KGKPGYFEIA DGGTVFLDEI GELPLPMQAK LLRVLQDREV MRVGATQPKE VNVRIIAATN RNLAKEVEEG RFRSDLFYRL NVAVLRLPPL RERSDDILPL ADTFLDRFNA KYHRTMTMTR ATRHALGNYG WPGNVREMQN LIQSLVVTCD GRSIRPEHLP PHITRAGKST PYTPPAPEDE RPLKEIMADI EREILQEALK RHGSVCKVAS MYKISRTTLF RKLRDVQDGT HEDA
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