Gene Dde_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1270 
Symbol 
ID3755259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1286947 
End bp1288341 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content56% 
IMG OID637782141 
ProductFis family transcriptional regulator 
Protein accessionYP_387766 
Protein GI78356317 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.912527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAG TAATACAACA TATAGAAAGC ATATTTGATG TATTAAGTGA CGGGATATAC 
ATTACAGACA AATCCGGAAA GACCCTGTTC GTCAACAAAC GGTACGAACA GCTTACCGGC
CTGCAGATGA AAGACATCAA GGGACTGAAT GTCAGCACCC TGCTGGAAGA AGGTGTCTTT
GACATCATTC TGAACCCAGA AATAGTCCGC ACACGCCGCC CGGCCACATC CGTGCAGAAT
GTCCGGCAGA GCAAAAAGGT CATCCTGCGC GGCTATCCTG TGTTTGACGA TGAAGGTGAA
GTCTGTCTTG TGGTCACATT CGCACGCGAC ATCACCATGA TAACCCAGTT CCGCGACCAG
ATAGCCCAGC AGCGCGAGCT GATAGACTCG TTCAACGAGC GCATGGAACA CATGGCGCAG
GAGCAGACCC GCCACCCGCG CCCCGTATTT GAAAGTCATG CCATGAAACG GGTTCTGGAA
CTGCTGCAGC GCGTGGCTTC CACCGATGCC ACCATGCTTA TTCTGGGTGA AACAGGGGTG
GGCAAAGATG TGATTGCCCG TCTTGCCCAT GAATACAGTC CCCGCGACGG CAAGCTGTTC
ATGAAGGTGG ACTGCGGCAG CATAGCTGAA AATCTTATAG AATCTGAATT GTTCGGCTAT
GTTCCGGGTG CGTTTTCCGG AGCAAGCAGC AAAGGGAAAC CGGGTTACTT TGAAATAGCC
GACGGCGGTA CAGTTTTTCT GGACGAAATA GGCGAGCTGC CGCTGCCCAT GCAGGCAAAG
CTGTTGCGCG TGCTGCAGGA CAGAGAGGTC ATGCGCGTGG GCGCCACGCA GCCCAAAGAG
GTCAATGTGC GCATCATCGC CGCCACCAAC CGCAATCTGG CAAAAGAGGT GGAAGAAGGG
CGGTTCCGCA GCGATCTTTT TTACCGCCTG AATGTGGCCG TGCTGCGGCT GCCGCCGCTG
CGCGAACGCA GCGACGACAT TCTTCCGCTG GCAGACACGT TTCTTGACCG GTTCAATGCC
AAATACCACC GCACCATGAC CATGACCAGA GCCACTCGCC ACGCTCTGGG CAACTACGGC
TGGCCGGGCA ATGTGCGTGA GATGCAGAAT CTTATCCAGA GCCTTGTGGT CACATGCGAC
GGGCGCTCTA TCCGCCCCGA GCATCTGCCG CCGCATATCA CCCGCGCAGG CAAAAGCACC
CCCTACACGC CCCCCGCCCC CGAAGACGAG CGCCCGCTGA AGGAAATCAT GGCCGACATC
GAACGGGAAA TTCTGCAGGA AGCCCTCAAA CGTCACGGCT CGGTATGCAA GGTGGCATCC
ATGTACAAAA TAAGCAGGAC CACCCTGTTC AGAAAATTAC GTGACGTACA GGACGGCACG
CACGAAGACG CCTGA
 
Protein sequence
MRKVIQHIES IFDVLSDGIY ITDKSGKTLF VNKRYEQLTG LQMKDIKGLN VSTLLEEGVF 
DIILNPEIVR TRRPATSVQN VRQSKKVILR GYPVFDDEGE VCLVVTFARD ITMITQFRDQ
IAQQRELIDS FNERMEHMAQ EQTRHPRPVF ESHAMKRVLE LLQRVASTDA TMLILGETGV
GKDVIARLAH EYSPRDGKLF MKVDCGSIAE NLIESELFGY VPGAFSGASS KGKPGYFEIA
DGGTVFLDEI GELPLPMQAK LLRVLQDREV MRVGATQPKE VNVRIIAATN RNLAKEVEEG
RFRSDLFYRL NVAVLRLPPL RERSDDILPL ADTFLDRFNA KYHRTMTMTR ATRHALGNYG
WPGNVREMQN LIQSLVVTCD GRSIRPEHLP PHITRAGKST PYTPPAPEDE RPLKEIMADI
EREILQEALK RHGSVCKVAS MYKISRTTLF RKLRDVQDGT HEDA