| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1268 |
|---|
| Symbol | |
|---|
| ID | 3755257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 1283369 |
|---|
| End bp | 1284793 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637782139 |
|---|
| Product | putative sodium:solute symport protein |
|---|
| Protein accession | YP_387764 |
|---|
| Protein GI | 78356315 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCA CATTCTATGT TATTCTGGCC TATATGGCGT GCATGATCGG AATCGGCCTG
TGGGTCGCCA AACGCAAAAT CCGTCAATCT GAAGATTTTC TTCTGGCAGG CCGGCAGCTT
GGTCCGGCTA TGATGGCAGG GACTCTCGCC GCCGCCGAAA TCGGCGGCGG CAGTACCCTG
GGCGTTGCGG CCAAGGCCTA TGGCGAATGG GGTTTTTCCG CAGGATGGTA CGTTGTCAGC
GCCGGTATCG GCATCTTTCT GGTGTCGTTC GTCGCCCCGT ATCTGCGCCG CTCCATGGCC
ACCACGGTTC CTGAAATTCT GGCACGGCGT TACGGCCGCA CATCGCATAT CATAACCACT
TTTCTTTCCA TCAGCGCCCT TTTCTTTGCC ACGGCTGCGC AGGTCATTGC CACCTCGTCG
GTCATCCATG TGGTAACCGG CGCCGACCTG CCCATGGTCA TCATCCTTTC CGGCTGCGTG
GTCACGGCCT ACACGCTCAT GGGCGGGCTC ATGTCGGTGG CCTTTACCGA TATCGTGCAT
ATATTCTTCA TCACGGTAGG TATGGCTGTG GCCATGCCCA TCATTCTGCA CAACTCCGGC
GGGTGGGACC ATCTTGTGGC CACGCTGCCT CCTTCGCAGA TGAGCCTGAC CAACGTGGGC
TGGAAGACTA TATTCGGACT TATCCTTATG TACTTCATGA CCTTTTCCAC AGGTCAGGAA
GCGGTTCAGC GGTATTTTGC CGCACGTAAC GCCAAAGTGG CCAAAATGGG CTCCTTCATG
TGCTCCTGCC TGATGGCCCT GTACGGCTTC ATTCCGGCAG TCATAGGTCT GGTGGCACTG
GCCCACTTCC CCGGTATCGA ACCCAACAGT GCGCTGCCCA CGGCCGCGCA GCATTTCGCC
CCGACCATCA TCGCAGGCGT GGTTCTGGCA TCGGTGGTGG CGGCAACCAT GTCCAGCGCC
TCCGGCAACA TGCTGGCCGT GTCCACACTG TTCACCAAAG ACGTCTTTCA GAAGTATATC
CGCCCCGATG CCACAGACAA GCAGCTCATG ACATGGAGCA AGGGCGCCAT CCTGTTCGTG
GGCATGTGCG CCGTGGGCAT CGCGCTGGGT AACTACTCCA TCATATCGCT GCTCATTCTG
GCATTCACCA TGCGTGCCGC CGGTCCTTTC GCAGCGTTCG TCTTCGGGCT GATTTATGAA
AAAGCCACCG TAAACGCCGG ACTGTACTCC ATCATTCTGG GGTCCGTGGC TGCCATCGGA
TGGCAGCAGG CCGGTGAACC CTACGGCATC ATGGCCATCG TGTTCGGCGC GCTGGTCAGT
ACCGTGAGCT TCTTTGCGAT TTCCAAGATT GAAATCGCCA TGGGTGTTGC GCCTGCCCCG
CTGGCCATCA CCGAAGAACA CCGCAAGGCG AGCGGCGAAG AGTAG
|
|---|
| Protein sequence | MTSTFYVILA YMACMIGIGL WVAKRKIRQS EDFLLAGRQL GPAMMAGTLA AAEIGGGSTL
GVAAKAYGEW GFSAGWYVVS AGIGIFLVSF VAPYLRRSMA TTVPEILARR YGRTSHIITT
FLSISALFFA TAAQVIATSS VIHVVTGADL PMVIILSGCV VTAYTLMGGL MSVAFTDIVH
IFFITVGMAV AMPIILHNSG GWDHLVATLP PSQMSLTNVG WKTIFGLILM YFMTFSTGQE
AVQRYFAARN AKVAKMGSFM CSCLMALYGF IPAVIGLVAL AHFPGIEPNS ALPTAAQHFA
PTIIAGVVLA SVVAATMSSA SGNMLAVSTL FTKDVFQKYI RPDATDKQLM TWSKGAILFV
GMCAVGIALG NYSIISLLIL AFTMRAAGPF AAFVFGLIYE KATVNAGLYS IILGSVAAIG
WQQAGEPYGI MAIVFGALVS TVSFFAISKI EIAMGVAPAP LAITEEHRKA SGEE
|
|---|
| |