| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1261 |
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| Symbol | |
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| ID | 3755250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1275533 |
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| End bp | 1277497 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637782132 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_387757 |
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| Protein GI | 78356308 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTGCTC CCGGGGTTGC CTGCCGGTGG TACCGGCGGG AGGAGGTCGT ATTGCGCGCC
AATGCCAGCA TTGCAGGCCG TATCGGTCTT TTGCTGCTCT TTCTTATTGT CTTCGCCTCT
GCCATCGGAC TCACATACAC CTACTACATC AAGCTTGTGC AGTCCGATTC GCTGGCAGAG
GTAAAATCGG CCACGGTGCA CGGCTACGAA CGAACTCTGC GCTACTCGGT GCAAAGCATG
GCCGCGGCAT TGTCGGACGC CATGACCAAA GCCCGTGAAC GGGGCGATAA TCCGGTTGAT
GTGCTGCGGC GCACCATCAA TGCCGTGCGC TACGACAACG ATGGTTATTA CTTTGTCTAC
GACCTCAACG GCATCAACAT CGTCCATCCT CTTGACCCCG CTTTTCAAGG CACCGACCGC
CTGAACCACC ACGACAAAGA CGGCGTGCCC TACATCAGTA TTCTGGCATC ACTGGTCCGC
AGCGGCGGCG GTTATGTTTC GTACAGCTTT CACAAGCCCG GCGAAACCAC CCCGCTGCCC
AAACTGGCCT ACGCCGAGAT TATTCCCGGT ACCGACTTCT GGCTGGCCAC AGGCATCTAC
ACCGACAACA TCCAGAACGA ACAGGAAAAG CTGGCCGCGC GTCTTGACGG GCATATCAAC
AAGGCCCTGA TGATCGTGGG CGTGGGGGTT TTCATCACCC TTGTCTTTTT TGTACTGCCC
ACCAGCCTGT ATATGGTCAG CGGCATTCTT AAACCGTGGC GCCAGATGGA ACGCGAACTG
CGTCATGCAC AAAAAATGGA GGCCATCGGC ATTTTTGCTG GCGGCATAGC GCATGATTTC
AATAATATTC TCGGTGCCAT ATCGTCATGC AGCGAACTGG CACTGGAAGA TACGCCGGAA
GACAGCCCCG TGCGCGAAGA CCTGTACCAT GTGCTCAAGG CGGCACGGCG GGGTAAAAAT
CTTGTCAAAC GCATCAAGAC GTTCAGCCAG CGCACCGAAC TGACCAAAAC CACGGTGCAG
GTACGATACA CCGTACAGGA ATGCATCCAG CTGCTGCAGA CATTCATTCC CGCCACAGTG
GAGGTCCGCC TGCGCATCAA TGCGCCCACC GCGCAGGTAA AAGCCGACCC GGACCAGCTG
CTGCAGGTGC TCATGAACCT GTGCACCAAC GCCGAGCAGG CCATGCGCGG CATGAAAGGC
CTGCTGGAAA TCACACTGGA CATGGAAACT CTGGACACCG GACACGCCGC CCCGCTGGAA
CTGCCCGCGG GACGTTATGT GGTCATATCC GTACGCGACA CGGGTACAGG CATGAAGCCG
GTGGTCATGA AACACGTGTT TGAACCTTTC TACACCACAC GCAAAAAAAG CGGCGGAACG
GGGCTGGGAC TTTCCATCAC CCAAAACATC GTCCGGCTGC ACGGCGGGCG CATAACGGTG
GACAGCGCGC CCAGCAGGGG CTCAACCTTC CGCGTGTACC TGCCCTGCAG CGGCATGGCC
GAAGAAGTAC AGGAAAAACA GATACGTTCC GCACTGCAGC GCGGCAATGA ATCGTTGCTG
ATAGTGGATG ACGACGATGA CCTGGCCTAT TCCGTGGGAA AACTGTTCAC GCGGCTGGGA
TACAAAGTCA CCAGCGTCAC ACGCAGCAAA GAGGCACTGG AACTTTTCAG ACGAAAGCCC
CATGCCTTTG ATCTGGTACT TACCGACCAG ATGATGCCCA ACCTCACAGG CGTGGAACTG
ACTCGCGAGC TGCTGAGCAT CCGGCCGGAC CTGCCCGTCA TCATGTACAC CGGCTTTGAA
GGCACTGGGA ACCTGTCGCG CTATCCCAAA GACTGGCGCA AGGTCGGGGT GGCGGCCTTT
TTCTACAAAC CGTTTGATAC CGCGGCTCTG AGCGCGGAAA TACGCACCCA GCTGGACAAG
CATAAAAAGC ACAGGAGCAC CGCACATGCG CGTTCTGATC ATTGA
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| Protein sequence | MLAPGVACRW YRREEVVLRA NASIAGRIGL LLLFLIVFAS AIGLTYTYYI KLVQSDSLAE
VKSATVHGYE RTLRYSVQSM AAALSDAMTK ARERGDNPVD VLRRTINAVR YDNDGYYFVY
DLNGINIVHP LDPAFQGTDR LNHHDKDGVP YISILASLVR SGGGYVSYSF HKPGETTPLP
KLAYAEIIPG TDFWLATGIY TDNIQNEQEK LAARLDGHIN KALMIVGVGV FITLVFFVLP
TSLYMVSGIL KPWRQMEREL RHAQKMEAIG IFAGGIAHDF NNILGAISSC SELALEDTPE
DSPVREDLYH VLKAARRGKN LVKRIKTFSQ RTELTKTTVQ VRYTVQECIQ LLQTFIPATV
EVRLRINAPT AQVKADPDQL LQVLMNLCTN AEQAMRGMKG LLEITLDMET LDTGHAAPLE
LPAGRYVVIS VRDTGTGMKP VVMKHVFEPF YTTRKKSGGT GLGLSITQNI VRLHGGRITV
DSAPSRGSTF RVYLPCSGMA EEVQEKQIRS ALQRGNESLL IVDDDDDLAY SVGKLFTRLG
YKVTSVTRSK EALELFRRKP HAFDLVLTDQ MMPNLTGVEL TRELLSIRPD LPVIMYTGFE
GTGNLSRYPK DWRKVGVAAF FYKPFDTAAL SAEIRTQLDK HKKHRSTAHA RSDH
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