| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1253 |
|---|
| Symbol | |
|---|
| ID | 3755242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1267517 |
|---|
| End bp | 1268833 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637782124 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_387749 |
|---|
| Protein GI | 78356300 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTGT TCACCAAGGA AGAAGCGCTG CACTATCACG AAGCCCCCCG CCACGGTAAG
GTGGAGGTCA TTCCCGTAAA ACCGTGCCGC AACCAGAAAG ACCTTTCCAT GGCGTATTCG
CCCGGCGTTG CCGAAGCATG CAAAGCCATC AAGGAAGACC CTTCCAAGGC CGAGATATAC
ACCGGCAGAA GCAATCTGGT GGCTGTGGTA TCCGACGGCA CCGCAGTGCT CGGGCTGGGC
AATATCGGCC CGCTGGCCGG AAAACCGGTC ATGGAAGGCA AAGGCGTTCT TTTCAAAACA
TTTGCAGACA TTGATGTTTT TGACATCAAC CTCGACGTTT CCAGTGCCGA CCAGCTCATC
GGCGTGGTCA AGGCGCTGGA ACCCACCTTC GGCGGTATCA ACCTTGAAGA TATCAAGGCG
CCGGAATGCT TCTACATTGA AGATACGCTG AAAAAAGAAA TGAACATACC GGTGTTTCAC
GACGACCAGC ACGGCACGGC TGTCATTTCC GGCGCCGGCC TGCTCAACGC GCTGGAAATA
ACCAACCGCA AAGCCGAAAA CATGAAGGTC GTCGTGGTGG GAGCCGGGGC TGCAGGCATC
GCATGCGCCA AGTTCTACGT TTCGCTGGGC GTGGATCCCG CCAACATATA CATGTTCGAC
TCACGCGGAC TTATCCACAA GGGCCGTAAA GATCTGAACG AATACAAAGC TCTTTTCGCC
CAGCCGTCCG ATGCGGGCAC TCTGGCAGAG GTGATGAAGG GCGCAGACAT GTTCCTGGGG
CTTTCCACCA AAAACCTTGT CTCGCAGGAC ATGGTGCGCT CCATGGCCAA AGACCCCGTT
CTGTTTGCCA TGGCCAACCC CGACCCCGAA ATCACCTATC CCGATGCCAA GCAGGCAAGC
CCCAACTGCA TCATGGGTAC AGGGCGCTCC GACTTCCCCA ATCAGGTCAA CAACGTATCC
GGGTTCCCCT ACATCTTCCG CGGGGCGCTG GATGTGGGTG CCACCGAAAT CAACGAAGAA
ATGAAAGTGG CGGCAGCCCG TTCGCTGGCA GCGCTGGCCA AAGAACCCGT ACCTTCGGAG
ATATGCGACA TGTACGGCGT GAAGGAACTG ACCTTCGGCG TCGACTATGT CATCCCCAAG
CCTCTCGATC CCAGAGTTCT TGTCTGGGAA ACCCCCGCTG TTGCCAAGGC AGCCATGGAC
TCCGGCGTGG CCAGAAAGCC CATCGCCGAC ATGGAAGCCT ACAAAAAGCA GCTCACCACC
CGCTTCGATG AGTCGCGCAA GCGTATTGCG CGTGTTGTCG ACAGCTACGG TCTTTAA
|
|---|
| Protein sequence | MALFTKEEAL HYHEAPRHGK VEVIPVKPCR NQKDLSMAYS PGVAEACKAI KEDPSKAEIY
TGRSNLVAVV SDGTAVLGLG NIGPLAGKPV MEGKGVLFKT FADIDVFDIN LDVSSADQLI
GVVKALEPTF GGINLEDIKA PECFYIEDTL KKEMNIPVFH DDQHGTAVIS GAGLLNALEI
TNRKAENMKV VVVGAGAAGI ACAKFYVSLG VDPANIYMFD SRGLIHKGRK DLNEYKALFA
QPSDAGTLAE VMKGADMFLG LSTKNLVSQD MVRSMAKDPV LFAMANPDPE ITYPDAKQAS
PNCIMGTGRS DFPNQVNNVS GFPYIFRGAL DVGATEINEE MKVAAARSLA ALAKEPVPSE
ICDMYGVKEL TFGVDYVIPK PLDPRVLVWE TPAVAKAAMD SGVARKPIAD MEAYKKQLTT
RFDESRKRIA RVVDSYGL
|
|---|
| |