Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1209 |
Symbol | |
ID | 3755274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1235877 |
End bp | 1237859 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637782079 |
Product | heterodisulfide reductase, A subunit |
Protein accession | YP_387705 |
Protein GI | 78356256 |
COG category | [C] Energy production and conversion |
COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCATAG GCGTTTTCGT CTGCCACTGC GGGAGCAACA TCGCCGCCAC CGTCGACTGT CCTTCGGTTG CGGAGACGGC ACGGATGTTC CCCGATGTGG TGTATTCCAC CGATACCATG TACGCCTGTT CCGAACCGGG GCAGGAGGGT ATAGTGCAGT CCATTGCCGA GCATAATCTG GACGGCGTGG TGGTGGCTTC CTGTTCGCCC CGCATGCACG AACCCACCTT CCGGCGCGCG CTGGAGCGTG CCGGGCTGAA CCGCTACATG CTGGAAATGG CAAACATCCG CGAACATGTT TCGTGGATCG GCAAAGATAT CAGACGCAAC ACGGTCAAGG CCTCGGACCT GATACGTATG GCCGTGGAAA AGCTGCGCCA TAACGCTCCC CTTACGCCCA AGCACTTCGA GGTGACCCGC AGAGCGCTGG TCATCGGCGG CGGCGTGGCG GGCATTCAGG CCGCGCTGGA CTGTGCCGAT GCAGGCATAG AAGTGATCAT GGTGGAGCGC GAACCCAGCA TAGGCGGCAA AATGGCCAAG CTGGACAAGA CGTTTCCCAC TGTGGACTGT TCGTCCTGCA TTCTCGGTCC CAAGATGGTG GACGTGGCTC AGCATCCCAA CATCACGCTG TACGCCGCTG CCGAAGTGGA CGAGATAAGC GGCTATGTGG GTAACTTTGA GGTCAAAATC CGCCGCAGGC AGACCTATGT TGACTGGTCC AAATGTACCG GTTGCGGCCT GTGCATGGAA AAATGCCCCA GCAAAAAAAG CTTCGACCGC TTTAACGAAG GGGTGGCCAC AACCACGGCC ATCAATATAC CCTTTCCGCA GGCCATTCCC AAAAAGGCTT CCATCGATCC CGACTACTGC CGCAAGCTGC AGGGTAAAAA ATGCGGCGTG TGTGAAAAGT TCTGCCCCAT GGGCTGCATC GATTTCGAGC AGCAGGAGAC CGTGGTCACC GAAAAAGTGG GCGCCATTGT GGCGGCCACG GGGTACGATC TTTTTGACTA CACGGTGTAC GGCCAGTACG GCGCCGGAAA ATACCCCGAT GTCATCACAT CGCTGCAGTA CGAACGCCTG ATGAATGCCT CCGGCCCCAC CGGCGGCCAC ATCAAGCGTC CTTCGGACGG CAGGGAACCC AAGGAAGTGG TTTTCATCCA GTGCGTGGGG TCGCGCGACC CCGCCGTGGG CAGACCCTAC TGCAGCGGAT TCTGCTGCAT GTATACCGCC AAACAGGCGG TGCTGACCAA AGACCACATC CCCGATTCCA ACTCCTATGT TTTTTACATG GATATCCGCG CCCCCGGCAA AGGATACGAC GAGTTTACGC GGCGCGCTCA GGAACAGTAC GACGTGCAGT ATGTGCGCGG CCGTGTTTCC ATGATTTTCC CGCGCGGCGA CAAGCTGGTG GTACGCGGTG CCGACACGCT GGCAGGCACG CAGGTAGAGG TTGAAGCCGA CCTTGTGGTG CTGGCCGTGG GGGTTGAGGC TGCTCATGGT GCGCCTCAGC TGGCCGAAAA ACTGCGTATT TCCTACGATC AGTACGGCTT TTTCATGGAA TCGCACCCCA AGCTGAAACC CGTGGAAACC AACACCGCCG GTGTGTATCT GGCCGGAGCC TGTCAGGGCG CCAAGGATAT TCCCACATCA GTGGGACAGG GCAGTGCCGC GGCTTCCAAG GTGCTGACAC TGTTCTCGCG TGAAATGCTT GAGTCGGACC CGCAGGTTGC CAAGGTTGAT ACGGCGCGCT GCGTGGGCTG CATGAAGTGC GCCATGACAT GTCCTTTCGG CGCGGTGCGT GAAACGCAGG ACCGTGCAGG CAATGTGAAG GCGGACGTGC TGGAAACCGT GTGTCAGGGC TGCGGCATTT GCACGGCAAC CTGTCCGCAC GGGGCCATTC AGCTGCAGCA TTTCACAGAC AACCAGATTC TTGCGGAGGT TAATGCCTTA TGTCCGCCCC TGATGGACGA GAGCTTCGAA TAG
|
Protein sequence | MRIGVFVCHC GSNIAATVDC PSVAETARMF PDVVYSTDTM YACSEPGQEG IVQSIAEHNL DGVVVASCSP RMHEPTFRRA LERAGLNRYM LEMANIREHV SWIGKDIRRN TVKASDLIRM AVEKLRHNAP LTPKHFEVTR RALVIGGGVA GIQAALDCAD AGIEVIMVER EPSIGGKMAK LDKTFPTVDC SSCILGPKMV DVAQHPNITL YAAAEVDEIS GYVGNFEVKI RRRQTYVDWS KCTGCGLCME KCPSKKSFDR FNEGVATTTA INIPFPQAIP KKASIDPDYC RKLQGKKCGV CEKFCPMGCI DFEQQETVVT EKVGAIVAAT GYDLFDYTVY GQYGAGKYPD VITSLQYERL MNASGPTGGH IKRPSDGREP KEVVFIQCVG SRDPAVGRPY CSGFCCMYTA KQAVLTKDHI PDSNSYVFYM DIRAPGKGYD EFTRRAQEQY DVQYVRGRVS MIFPRGDKLV VRGADTLAGT QVEVEADLVV LAVGVEAAHG APQLAEKLRI SYDQYGFFME SHPKLKPVET NTAGVYLAGA CQGAKDIPTS VGQGSAAASK VLTLFSREML ESDPQVAKVD TARCVGCMKC AMTCPFGAVR ETQDRAGNVK ADVLETVCQG CGICTATCPH GAIQLQHFTD NQILAEVNAL CPPLMDESFE
|
| |