Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1193 |
Symbol | |
ID | 3755217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1221581 |
End bp | 1222312 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637782063 |
Product | ATPase |
Protein accession | YP_387689 |
Protein GI | 78356240 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.076328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCTG AAACTGCTTT GCTGCAACTG CGCGGGGTCC GTTACCGGTA TCCGGGAGCG GAAAATGACG TGCTGGCCGG TATTGATTTT GCGCTGCACC GCCATGACCG CCTCGGGCTG TACGGCCCGA ACGGTTCGGG TAAAACCACT TTTCTGCATA CCATAATGGG GTTGGTGTGC CCCCGGCAGG GTGAAGTGCT GTTCGAAGGA CGCAGCGTTC GGTCGGAAAA AGACTTCCGC GCGGTGCGCA GCCGGATAGG CCTGTTGCTG CAGAATGCGG ACGATCAGCT TTTTTGCCCC ACCGTGCTGG AAGATGTGGC ATTCGGGCCG CTCAATCTGG GCATGGCTCC TGAACGGGCC GCGGAACATG CGCGGCAGAC ACTGGCCGCG CTGGGGCTGC AGGGCTTTGA CAGCCGCCTG ACACACAGAC TGTCAGGTGG TGAGAAAAAG CTTGTTTCTC TGGCCGCGGT GCTGGCCATG CAGCCGGACG CACTGTTGCT TGATGAACCC ACAAACGGTC TTGATCCGGC AACACGCCTG CATATTATTG ATATTTTAAA CAGTCTGGAC GCCGCTCTTA TCATCATATC TCACGACTGG GATTTTCTGC ACCGTACGGT GTCACAGTAT CTTACTCTGA AAGCCGGACA CCTTGTGCAT GATCCGGAAA TGGTGCCCCA CCATCACGCA CACGCCCACC CGCACGGGGG CGAACCCCAC GCACACAGCT GA
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Protein sequence | MSSETALLQL RGVRYRYPGA ENDVLAGIDF ALHRHDRLGL YGPNGSGKTT FLHTIMGLVC PRQGEVLFEG RSVRSEKDFR AVRSRIGLLL QNADDQLFCP TVLEDVAFGP LNLGMAPERA AEHARQTLAA LGLQGFDSRL THRLSGGEKK LVSLAAVLAM QPDALLLDEP TNGLDPATRL HIIDILNSLD AALIIISHDW DFLHRTVSQY LTLKAGHLVH DPEMVPHHHA HAHPHGGEPH AHS
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