Gene Dde_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1188 
Symbol 
ID3755212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp1217398 
End bp1218375 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content61% 
IMG OID637782058 
ProductK+-dependent Na+/Ca+ exchanger related-protein 
Protein accessionYP_387684 
Protein GI78356235 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000354687 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACGC TTCCTATTCT TGCTATTGTG GCAGGTCTTG TGCTGCTTGT GTACAGCGCA 
GACCGTTTTG TGCTGGGGTC TTCCGCCACG GCACGGCATT TCGGCATGCC TCCGCTGCTT 
ATCGGCATGG TCATTGTGGG CTTCGGCACT TCCGTGCCTG AAATGCTTGT TTCACTTATG 
GCCGCCATGA GCGGAACCCC CGGCATCGCG CTGGGCAACG CTTACGGCTC CAATATAACC 
AACATAGGTC TCATACTGGG CGCCACTGCC GTTCTGGGAC CTGTGATGGT CAGCTCTCAG 
GTGCTCCGTA AGGAGCTGCC CATTCTTATC GGGGTGACAC TGCTTACCGC CGCACTGTTG 
TGGGACGGCT CGCTGGACAG GACCAATGCT CTGGTGCTGC TCGCCGTGTT TTTTGTTCTT 
GTGGGCTGGT CTGTTTATCA GGGCATGCAT TCCACGCGCG ACGCATTCGG GCAGGAGATG 
GAACAGCAGG CCGGTACGCA GCCGCTGGCG CTCAAGGCCG CACTGGGCTG GACAGCCGCC 
GGACTGGTGT TGCTCATTAT CAGCTCGCGC ATGCTTGTGT GGGGTGCCAT GAAAGTAGCC 
GTGGCGCTGG GCATGAGCGA TCTGGTCATA GGGCTGACCA TTGTGGCTGT GGGCACTTCG 
CTGCCCGAGC TGGCTTCTTC GCTGGCTGCC GCCCGTCGCG GAGAGCACGA CATAGCGCTG 
GGCAACGTTG TGGGCTCCAA CCTGTTCAAC ACACTGGCTG TTGTGGGCAT AGCCGGAGCG 
GTGCAGCCCA TGCAGGTGGA CCCGTCCGCC CTGGGACGCG ATCTGCTGGT CATGGGCGGC 
TTTACCGTGG CGCTTTTTGT CATGGGATAC CCCGTGCGCC GCGCGGGCCG CATCAACAGG 
CTGGAAGGGG CCGCACTGCT GTGCGCATAT GCTGCGTACA CTGTCTGGCT GGTGGGCGTG 
GCAGGCCAAA GCGCCTGA
 
Protein sequence
MMTLPILAIV AGLVLLVYSA DRFVLGSSAT ARHFGMPPLL IGMVIVGFGT SVPEMLVSLM 
AAMSGTPGIA LGNAYGSNIT NIGLILGATA VLGPVMVSSQ VLRKELPILI GVTLLTAALL 
WDGSLDRTNA LVLLAVFFVL VGWSVYQGMH STRDAFGQEM EQQAGTQPLA LKAALGWTAA 
GLVLLIISSR MLVWGAMKVA VALGMSDLVI GLTIVAVGTS LPELASSLAA ARRGEHDIAL 
GNVVGSNLFN TLAVVGIAGA VQPMQVDPSA LGRDLLVMGG FTVALFVMGY PVRRAGRINR 
LEGAALLCAY AAYTVWLVGV AGQSA