Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1183 |
Symbol | |
ID | 3755207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1212208 |
End bp | 1213113 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637782053 |
Product | putative permease of ABC transporter |
Protein accession | YP_387679 |
Protein GI | 78356230 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.056047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCAGG TACTTACAGG CACCACCGCT GCCCAAGAGG AAAAATCACA CACCCCTCTG GTCGAAGCCA TGCTGAGGCT GCACAAAAAC CGCACAGCCA TGGCCGGACT CGTCATTGTG GGCATATTTG TATTTCTGGC CTTGTTCGGC CCGCTTATAG CGCCGCATGA CCCGCTGGAA CAGTCACTGT ACAACAAGCT CAAACCGCCG GTATGGGATG CCAGAGGCAG CATGAGCTTT TTTCTGGGAA CCGATGATTT CGGCCGCGAC CTTCTTTCGC GCCTCATACA CGGCGCCCGC ATTTCCATGC TTGTCGGGGT GGTATCGGTA TCCATCTCTT TGTTTTTCGG CACCATTGCC GGTGCAGTGG CCGGTTTTTA CCGTGGCTGG GTCGATGTCA TCATCATGCG CGTCATGGAC ATTCTGCTGG CTTTCCCCAG CATTCTGCTG GCTATCGTCA TTGTGGCTTT TTTAGGCCCC AGTCTGGAAA ACGCCATGAT CGCCATCGGC ATCGTATCCA TTCCGCGCTA TGCCCGCATC GTACGCGGCA GTGTGCTGGA AGAATATTCC AAAGACTATG TGCAGGCCGC CCGCGCGCTG GGAGCCTCCG ACTTCCGTCT TATTTTTCAG CACATTCTGC CCAACTGTCT GGCGCCGCTC ATCGTGCAGA CCACGCTGGG CTTCGCTTCC GCCATTCTAG AGGCGGCAGC CCTCAGCTTT CTGGGGCTGG GCGCGCAGCC TCCGACCCCG GAATGGGGGG CCATGCTGGC CGGCGGCCGC GCATTGATTC TGCGCGCATG GTGGGTGGTC ACCTTTCCGG GCATCACCAT ACTGCTGGCC GTTCTCGGCT TTAACCTGCT GGGCGACGGG CTGCGTGATG CGCTCGACCC GAGACTGCGC GATTAG
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Protein sequence | MSQVLTGTTA AQEEKSHTPL VEAMLRLHKN RTAMAGLVIV GIFVFLALFG PLIAPHDPLE QSLYNKLKPP VWDARGSMSF FLGTDDFGRD LLSRLIHGAR ISMLVGVVSV SISLFFGTIA GAVAGFYRGW VDVIIMRVMD ILLAFPSILL AIVIVAFLGP SLENAMIAIG IVSIPRYARI VRGSVLEEYS KDYVQAARAL GASDFRLIFQ HILPNCLAPL IVQTTLGFAS AILEAAALSF LGLGAQPPTP EWGAMLAGGR ALILRAWWVV TFPGITILLA VLGFNLLGDG LRDALDPRLR D
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