Gene Dde_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1174 
Symbol 
ID3755198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1200789 
End bp1202975 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content59% 
IMG OID637782044 
Productmalate synthase G 
Protein accessionYP_387670 
Protein GI78356221 
COG category[C] Energy production and conversion 
COG ID[COG2225] Malate synthase 
TIGRFAM ID[TIGR01345] malate synthase G 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAA GAACACAGAC CGGCGGTCTG CAGGTGGCAT CGTGCCTTTC CTGCCTTGTC 
GCCAATGAGA TAGCGCCGGA TACGGGTGTC GACCCTGTGG ATTTCTGGGC GGGCGCCGAA
GCATTGTTCA GGGATTTTGC GCCGCGTAAC AAAGAGCTGC TGGAACTGCG CGAAAGCATG
CAGCAGTCCG TTGACGCGTG GCACCGCGAA CGTGCCGGCA AGCCCCACGA TGCGGCGGAA
TACAAGGCGT TTCTGGAAAA AACAGGCTAT CTGCTGCCTG AAGGGGAGGA TTTTACCATT
TCTCCTGAGA ATGTGGACCC GGAAATAGCC GAGGTTGCCG GACCGCAGCT GGTAGTGCCC
ATTACCAACG CCCGTTATGC CGTCAATGCG GCCAATGCCC GTTGGGGCAG CCTGTATGAC
GCTCTGTACG GCACCGACGT GATCGCTGAA ACGGACGGCA TGGAAAAAGG GCCGGACTAC
AATCCGGTGC GGGGCCGCGA GGTAATGCGT CTTGCAACGG CGTTTCTGGA CAAAGCAGTG
CCGCTGGACG GAATGTCGCA TGGTGATGTG ACTGCGTATA TCCTGCTTCG GGACGGCCGG
CGCCGTGTGC TGGCGGCCCG CGACGCATCG GGGAAAGAGA CGGGACTCGC CGCGCCGGAG
CAGTTTGTCG GTTTTTCCGG CGGTGATGCG CCTGCCGTGG TTGTTCTGCG CAATAACGGC
CTGCATATTG AGCTGCATGT GGACAGAACG CATCCCGTGG GGGCGGCGCA TCCTGCCGGT
GTGAAAGATG TGGTCCTTGA AGCGGCAGTG ACTACCATTC AGGACTGCGA AGATTCTGTA
AGCGCCGTGG ATGCCCACGA CAAGACCAGA ACGTACCAGT CATGGCTGGG GCTGATCAAA
GGCGATCTGG AAGCCAGCTT TGTGAAGGAC GGAACACTGC GCGTGCGCAC GCTCAATCCG
GACAGGGAAT ATACGGCGCC TGACGGCAGC GCTCTTGTGC TGCCCGGCCG CAGCCTGATG
CTTATCCGCA ACGTGGGGCA TCTTATGACC ACGGATGCCG TGCTGACGGA GGACGGCAGC
CCCGTACCGG AGGGGATTCT GGACGCTCTG ATGACAGGCT ATGTGGCGCT GCACGAACTG
AAGGGCAACG TACGCTACCG CAACAGCCGC ACAGGCAGTG TGTATATCGT CAAGCCCAAG
ATGCACGGTC CGGAGGAAGT CCGCTTCACC TGCGATCTTT TCAGCAGGGT GGAGGATATT
CTGGGACTGC CCCGTCATAT GCTCAAGGTG GGGATTATGG ATGAAGAGCG CCGCACGTCG
CTGAATCTTA AAGAGTGCAT CCGCGCGGCC CGCGAACGGG TTATTTTTAT CAATACCGGC
TTTCTGGATC GTACCGGCGA CGAGATTCAT ACCTGCATGG AGGCGGGGCC GGTTGTCAGA
AAGAATGATA TGAAGGCGGA GCGCTGGATA GCTGCATACG AGGACTGGAA CGTGGATGTG
GGGCTGGCCT GCGGTTTTTC GGGCAGGGCG CAGATAGGCA AGGGCATGTG GCCCAAGCCC
GACAGCATGC GCGAAATGCT GGAAACCAAA GGGGCGCATC CCCGCGCGGG TGCAGGTTGC
GCATGGGTGC CCTCGCCTGC TGCAGCCACG CTGCATGCCA TGCATTATCA TGATGTGAAC
GTGCGCGATG TCCAGACAGC GCTGGCCGCC CGACGGCGCG CCTGCCGTGA TGACATGCTG
GTGCTGCCGC TGCTGCGTTC GGCACCTGAT GCAGGTGCTG TGCGTGAAGA ACTGGAAAAT
AACATCCAGA GCATACTCGG ATACGTGGTG CGCTGGATCG AGCAGGGAAT CGGTTGTTCC
AAGGTGCCTG ATATTCACAA TGTGGGGCTG ATGGAAGACC GTGCCACACT GCGTATTTCC
AGTCAGCATA TCGCCAACTG GCTGCATCAC GGCGTATGCA CGCGGGAAGA AGTTATGGCC
GTGTTTAAAA AAATGGCCGC AGTGGTGGAT TCGCAGAATG CCGGACATCA GGCGTACACG
CCCATGGCGC CTGATTTTGA ACGCAGCATC GCCTTTCAGG CGGCGTGTGA TCTGGTTTTC
AAGGGGCGCG AGCAGCCCAG CGGCTATACC GAGCCGGTGC TGCACCAGCG CAGGCGCGAA
GCAAAAACGC GTTTCGGGCA GGTGTAA
 
Protein sequence
MTTRTQTGGL QVASCLSCLV ANEIAPDTGV DPVDFWAGAE ALFRDFAPRN KELLELRESM 
QQSVDAWHRE RAGKPHDAAE YKAFLEKTGY LLPEGEDFTI SPENVDPEIA EVAGPQLVVP
ITNARYAVNA ANARWGSLYD ALYGTDVIAE TDGMEKGPDY NPVRGREVMR LATAFLDKAV
PLDGMSHGDV TAYILLRDGR RRVLAARDAS GKETGLAAPE QFVGFSGGDA PAVVVLRNNG
LHIELHVDRT HPVGAAHPAG VKDVVLEAAV TTIQDCEDSV SAVDAHDKTR TYQSWLGLIK
GDLEASFVKD GTLRVRTLNP DREYTAPDGS ALVLPGRSLM LIRNVGHLMT TDAVLTEDGS
PVPEGILDAL MTGYVALHEL KGNVRYRNSR TGSVYIVKPK MHGPEEVRFT CDLFSRVEDI
LGLPRHMLKV GIMDEERRTS LNLKECIRAA RERVIFINTG FLDRTGDEIH TCMEAGPVVR
KNDMKAERWI AAYEDWNVDV GLACGFSGRA QIGKGMWPKP DSMREMLETK GAHPRAGAGC
AWVPSPAAAT LHAMHYHDVN VRDVQTALAA RRRACRDDML VLPLLRSAPD AGAVREELEN
NIQSILGYVV RWIEQGIGCS KVPDIHNVGL MEDRATLRIS SQHIANWLHH GVCTREEVMA
VFKKMAAVVD SQNAGHQAYT PMAPDFERSI AFQAACDLVF KGREQPSGYT EPVLHQRRRE
AKTRFGQV