| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1172 |
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| Symbol | |
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| ID | 3755196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1197213 |
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| End bp | 1199804 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637782042 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_387668 |
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| Protein GI | 78356219 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTTT TTCTGCCCGC TGCCACACAA CAGCTGCCCG TGTCCGGAAT TCTGCAAGAA
CTTACCGACA CACTGGCCCG CACAACATGC TGCGTTCTGC AGGCCCCCCC CGGAGCCGGT
AAAACCACGG CGGTGCCACT GGCTCTGCTG CACGCGCAGC TGCCCGCCGG ACGTATAGTG
ATGCTGGAAC CCCGCAGGCT TGCAGCCCGC AGTGCCGCGC GGCGCATGGC TCAGATGCTG
GGGCAGCGCA CCGGTGAAAC TGTGGGATTC AGAGTGCGCC ACCACAGCTG TACAGGCTCC
GGTACCCGCA TAGAGGTGGT CACAGAGGGG GTGCTCACAC GCATGGTCCA GTCGGACCCC
GCTCTGACGG ATGTGGCATG CGTCATTTTT GACGAATTTC ACGAACGCAG CCTGCAGGGC
GATCTGGGCC TGACACTGTG TCTTGAAGTT CAGGCCGCCT TACGCCCCGA ACTGCGGCTG
ATTGTCATGT CCGCCACCCT TGACGGCGCT CCCGTGGCGG CGCTGATGGG CGGATGTCCG
GTACTGACCG CCACCGGACG CAGCCATGCC GTGCATACCC GGCACTTTGC GCCGCCTGCC
GGCCGTTCAA TGCTCGACAG ACATCACTGC ATACAGCTTA TTGCAGACGG CATACGCCGC
GCGTTGTACG AAGAACAAGG CAGTATTCTG GCCTTTCTGC CCGGTCTGCG GGAAATAACT
CTGGTGGCCG AGGCGCTGCA AGGCGCGGTG TCACCGGACG GCTGCCGCGT GCAGGTGCTG
CCGCTGCACG GCAGACTGCC CCCGCAACAG CAGGACGCGG CCATATGTCC CGCCCCGCAG
GGGGTGCGCA AAGTGGTGCT GTCCACATCC GTTGCCGAAA CAAGCCTGAC TCTTGAAGGC
ATACGCATTG TGGTGGACAG CGGCCTGACG CGCAAAGCAC AGTTTGACCC GCGCAGCGGC
ATGACGGGAC TGGTCACACG CAGAGCGTCA CTGGCCGCGG CCGCACAGCG GCAGGGACGC
GCCGGCAGGC TGCAGGAGGG TATCTGCTAC CGGCTGTGGA GCAAAGCCGA CGAACCGGCC
ATGCCCGCCT TTGACAGACC GGAAATACTG GAAGCAGACC TTGTGCCGCT GGCACTGGAA
CTGGCCCGCT GGGGGGCTTG CGACCATAAT TCGCTGCCGT GGCTGACACC GCCGCCGCAT
TCCAGCATGG AACAGGCCGC AATGCTGTTG TGCCAGCTGG GCGCTCTGAA GCCTGCCCCC
TCTACCGGTC TGCGTCACAT CACACAGCAC GGCGCGCGCA TGGCCGCCCT GCCGGTGCAC
CCGCGGCTGG CGCACATGGT AATCACAGCG GCGGATACGG GACAGCCAGA CATTCTGGAA
CAGGCCTGCC GCATAGCCGC CGTGTTTTCA GAAGCACCAT CGGCCCTGCG CAGGCAGGCC
GACCTGTGCA CCGTCATAGA AGACGCTGCC ACAGGCCGCA CCACAGACAG CCGTACGGCG
GCACGCACGG CGCAGATGAC CAGACGTCTG GCGGCCGCCG CCGGAAAAGG CCCGGACGAC
CGGCCGGCGG TACAGGCATT GCGCACACTG CCTGCGGATG CGCGCTGCGC TGCGCTCTGC
GCACTGGCCT TTCCCGACCG CATAGGCAAA GCCACGGGGC AGGGCCGCTT TCTGCTTACC
TGCGGCAGAG CCGCCATCGT AGCTGCCACC CACCCGCTGG CCGGCAGCCC CTTCATCGTA
GCGGCCGAGC TGGACGGACA AAACGCGGAC GCACGCATTC ATGCCGCCGC GGCGCTGGAC
AGCCGCACCG TGGAAACCCT GTACGCAGAC AACATCGCGC AGCAGGACAA CATTCAATGG
AACCCGCAGA CAGAAGCAGT GGAGGCAACG ACGCAACGCA CGCTGTGGAA GCTGCCGCTG
GAAGTGCGTC CTCTCGCAGA AAAACCCCAT ACGCAGGCCG CGGTGCAGGC CATGTGCGAA
GGCATCCGCA GCATGGGACT GAGTGCCCTG CCCTGGACCC GCGAGACAGA AACCCTGCGG
CAGCGGGTCA TGCTGCTGCG CAGGCACGAA CCGTGCGGAG CAGACCAGAT AAACATCTGG
CCCGATTTTT CGGAAGAAAC GTTGCTGGCG ACACTGGAAA CATGGCTTGC CCCTTTTCTG
GACGGTATCC GGCGGCGGAC ACAGCTGAAA AACCTGAACC TGAAAACAGC CCTGCAGGCG
ATGCTGCCAT GGCCGTTGCC TGCCCGTCTG GAGCAGGAGG CACCGGAACT GCTCACCGTC
CCTTCAGGTT CAAATATCCG GCTGGACTAT TCCGGCCCTG TGCCGGTGCT GGCGGTAAAG
CTGCAGGAAA TGTTCGGTGC CACAGCCACG CCCGCCATAG GCAACGGGCG CATACCGGTG
CTTGTCCATC TGCTTTCACC TGCGGGCAGA CCGCTGCAGA TAACTCAGGA CCTCGAAGGA
TTCTGGAAAA ACGGGTACCG GCAGGTCAAA GCTGAAATGA AAGGGCGCTA CCCCAAACAT
CCATGGCCCG ACGATCCTGT TTCCGCCCGC CCCACACGAC GGACAAATAC CGGCTCTAAA
AATGTATCAT AG
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| Protein sequence | MSLFLPAATQ QLPVSGILQE LTDTLARTTC CVLQAPPGAG KTTAVPLALL HAQLPAGRIV
MLEPRRLAAR SAARRMAQML GQRTGETVGF RVRHHSCTGS GTRIEVVTEG VLTRMVQSDP
ALTDVACVIF DEFHERSLQG DLGLTLCLEV QAALRPELRL IVMSATLDGA PVAALMGGCP
VLTATGRSHA VHTRHFAPPA GRSMLDRHHC IQLIADGIRR ALYEEQGSIL AFLPGLREIT
LVAEALQGAV SPDGCRVQVL PLHGRLPPQQ QDAAICPAPQ GVRKVVLSTS VAETSLTLEG
IRIVVDSGLT RKAQFDPRSG MTGLVTRRAS LAAAAQRQGR AGRLQEGICY RLWSKADEPA
MPAFDRPEIL EADLVPLALE LARWGACDHN SLPWLTPPPH SSMEQAAMLL CQLGALKPAP
STGLRHITQH GARMAALPVH PRLAHMVITA ADTGQPDILE QACRIAAVFS EAPSALRRQA
DLCTVIEDAA TGRTTDSRTA ARTAQMTRRL AAAAGKGPDD RPAVQALRTL PADARCAALC
ALAFPDRIGK ATGQGRFLLT CGRAAIVAAT HPLAGSPFIV AAELDGQNAD ARIHAAAALD
SRTVETLYAD NIAQQDNIQW NPQTEAVEAT TQRTLWKLPL EVRPLAEKPH TQAAVQAMCE
GIRSMGLSAL PWTRETETLR QRVMLLRRHE PCGADQINIW PDFSEETLLA TLETWLAPFL
DGIRRRTQLK NLNLKTALQA MLPWPLPARL EQEAPELLTV PSGSNIRLDY SGPVPVLAVK
LQEMFGATAT PAIGNGRIPV LVHLLSPAGR PLQITQDLEG FWKNGYRQVK AEMKGRYPKH
PWPDDPVSAR PTRRTNTGSK NVS
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