Gene Dde_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1168 
Symbol 
ID3755192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp1192739 
End bp1193323 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content60% 
IMG OID637782038 
ProductTPR repeat-containing protein 
Protein accessionYP_387664 
Protein GI78356215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.703043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAC ACAAAACCGC ACTGCTGCTG ACCCTGTGCG CCGCACTGCT GCTGACGGCA 
TGCGGCGGGC GCGAAGAACC GGAACTGCCG CGCTTCAACC CCATGGGCAT GAGCGGTACC 
CATTCGCAGG ACGCGGAAAA ATGGTATGCC ATGGCCCATG TGCTGTGGAA GGACAATACC 
TGCAGCGACC CCGAAAAAGC AGTGGAATAC CTGAACAAGG CGCTGGAGGC CGAGCCTGAC 
TATGCCGAAG CGCTTCTGCG GCGGGGGCTT GCCTACAGCG AACAGAAACG GTGGGAAAAA 
GCCTTTGACG ACATGACACA GGCCGTACGG CTGAAGCCTT CGGCTGAAAG CTATACATGG 
CGCGGTCTTG TAATGCTGCG CATGGGCAAC GCCATAGGCG CGGTGCGCGA CACAACGCGC 
GCGCTGGAAT ATGACACCGC GTATAATCAG GCATGGAACA TCAGAGGCGG CGCAAAACTG 
GTGCTGGGAG ACGCCGCCGG AGCATGCAGC GACTTTGAAA ACGGATGCTC CACGGGCGAC 
TGCACAGGGC TTGAGTCGGC CCGCAGACAG AACATATGCC CCTGA
 
Protein sequence
MTAHKTALLL TLCAALLLTA CGGREEPELP RFNPMGMSGT HSQDAEKWYA MAHVLWKDNT 
CSDPEKAVEY LNKALEAEPD YAEALLRRGL AYSEQKRWEK AFDDMTQAVR LKPSAESYTW 
RGLVMLRMGN AIGAVRDTTR ALEYDTAYNQ AWNIRGGAKL VLGDAAGACS DFENGCSTGD 
CTGLESARRQ NICP