| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1166 |
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| Symbol | |
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| ID | 3755190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1190082 |
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| End bp | 1192424 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637782036 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_387662 |
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| Protein GI | 78356213 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGCACG GAACGGGAAA ACGCATTGCG TTTATCTGCG CCGCCGTGCT GCTTATCGCC
ATTACAGCAT CGCTGGGAGC TGCTCTTTTT CTGCGCCTTG CCGGAATACC GGAAAGCGGG
GCACTTTTTG CTTTGCTGCC GCCGTTGGCC GGTGGTTGTG CCGCAACTCT GTGCGGTATC
GCCGCATGGC TGCAGATGCG CGCCGCGTGG ACAAAGCAGC TGCGCGAACA CGCGCGCACA
GCAGCCCAGC TCAGTTCGCT GGAAGAAAAC CACCATCAGC TGCGCAGACG CCTTGCAGAA
GCGGAGCGTG AGCGCGCCCA CCTGCGCAAG CAGGCGGACA GCGCCCTTTC CGACATTGCC
TCGCGCCGCG GAGAAGCAAA ATTTCAGGCC ACCTTTCACG CCACGCCGGA TCCCATAATG
GTGGTCAATC TGCACACCGG GCTGGTGCTG GACGTCAATG AAAGCCTGCA GCGCCTGCTT
GCCCGCGACT GGGGGCAGCT GCTGGGCGAA TCTCTGGACA GTCTGCTGGA ATGGGGCAAC
GGTGCGCGCA ACAGGTTTGA ACTGATGCTG GAGCGCGAAG GCAGTGTGAG CAACCTGCCC
GCCGTCATGC ACGACGGCGG CGGCACACCT CACCATGTGC TCATCTCCGC CCGCCATGTC
CAGCTGGAGG GGTTTTCCTG CGCCATCGCC ATTGCCCGTG ACATAAGCGA CCATCACCGG
CTGCAGGAAC AGCTGGCGGA AAAAACATCC CTGCTGGAAA ACGTTCTCGC GCACATTCCC
TACCATGTCT TCTGGAAAGA CAGAAACAGC AGGTATCTGG GAGCCAACGA ACTGTATGCC
CGCAACCTGT TCAACGCTTC TGTCAACGAC ATACTGGGGC TCACCGACAC CGATCTGGGC
ATGTCCGCCG TCCTCGGCGG CGCCATACTG CGCGAAGAAC AGGAAGTGCT GGACACAGGC
CGTCCGGTTA TCAATGCCGA ACGCACCATT CCGCTGCATG ACGGCAGAAC AGTCATAGGG
CTGGTGAGCA AAGTGCCTTT GCTGGATGCC AACGGACAAC CGCAGGGCGT ACTGGGTATT
TCGGCCGACA TAACCAACCT GAGAGCATAC GAACGGCAGC TGCACGCCCT GCTGGACGGA
CTGCCCGACA TGGCATGGAT CAAGGACGCA GGCAGTGTGT ATCTGGCCGT CAATCAGGCC
TTTGCCGATT TTCTGCACCG CGACCCGCTG GATGTTCCCG GCAGGACAGA CGAAGACCTG
TGGCCGGGCG AACTTGCCGC CAACCAGCGG CAGAGCGATG CCGACGCCAT GACAAGGCTG
GCCGACCTGC GATACGACCA GTGGCTTGCC GGTGCCGGAG GGGTCTCCAT CTGGGCCGAT
ATCATCAAAC GTCCCATCAT GGAAAAAGAC GCTTCGGGCA ACACCGTGGC CGTGGGTACG
GTGGGTATCG CCCGCGATAT CTCACAGCGG CGCGCTCAGG AAAGCCGCAT CCGCATGCTG
TCGGAAGCGC TGGAACAGAG TTCCGTGGCC GTGGTGGTCA CCGACCCTGC CGGAAACACC
GTGCACCTGA ACCCGCGTTA CGAAGAAATA ACCGGCTTTA CGCTGCACGA ACTGCAGGGC
AGGCCGCTGC CGCTGCTGGC CGACCCTGAA AGCTCGGCAC CGGTATGGGA GGCGCTGCAC
AAAGGTGAGC GCTGGCGGCA GGAGATAAAA AGCCCGCGCA AGGACGGCGA TGACCGCTGG
CTGTCTGTTT CCGTTGCTCC CGTGGTGGAC AACGACGGAC ATCCGGCCAA CATAGTTCTG
GTGCTGGAAG ACATCACGGA ACAAAAACGC AGCGAAGAGC ATATCCGGCA TCTGGCCATG
CACGACGGCC TGACGGGGCT GCCCAACAGA CGGCTTTTCA TGGACAGACT GCGCCGTTCC
GTTGCCATGA GCAAAAGAAA CGGGGTCCGT TTTGCCGTTC TGTTCATCGA CCTTAATGAT
TTTAAAGAGA TAAATGACAC TCTGGGCCAT GAAGCAGGCG ACCATGTGTT GCGCACCGTA
GCTGAAAGAC TGCGCCAGAG TCTGCGCGAG GTGGACACAT GCGCACGGAT CGGCGGAGAC
GAATTCATCG TTCTGCTGCA CGATATCCGC AGTAACGAAG ATCTGGCGCA CGCATCCGAA
CGGGTTTCCG CCGCCATCAG CACCCCCATA AACCTGAACG GCACCGTGCG TGTTGTTTCA
GGCTCCATCG GCATTGCCGT CTGCCCCGAC GACGCCACCG ACGTGGACCA GATTATCAGC
CACGCCGACC ACGCCATGTA CCGCTGCAAA CGCAACCGCA GATACGACAG TGCCTCACGC
TGA
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| Protein sequence | MQHGTGKRIA FICAAVLLIA ITASLGAALF LRLAGIPESG ALFALLPPLA GGCAATLCGI
AAWLQMRAAW TKQLREHART AAQLSSLEEN HHQLRRRLAE AERERAHLRK QADSALSDIA
SRRGEAKFQA TFHATPDPIM VVNLHTGLVL DVNESLQRLL ARDWGQLLGE SLDSLLEWGN
GARNRFELML EREGSVSNLP AVMHDGGGTP HHVLISARHV QLEGFSCAIA IARDISDHHR
LQEQLAEKTS LLENVLAHIP YHVFWKDRNS RYLGANELYA RNLFNASVND ILGLTDTDLG
MSAVLGGAIL REEQEVLDTG RPVINAERTI PLHDGRTVIG LVSKVPLLDA NGQPQGVLGI
SADITNLRAY ERQLHALLDG LPDMAWIKDA GSVYLAVNQA FADFLHRDPL DVPGRTDEDL
WPGELAANQR QSDADAMTRL ADLRYDQWLA GAGGVSIWAD IIKRPIMEKD ASGNTVAVGT
VGIARDISQR RAQESRIRML SEALEQSSVA VVVTDPAGNT VHLNPRYEEI TGFTLHELQG
RPLPLLADPE SSAPVWEALH KGERWRQEIK SPRKDGDDRW LSVSVAPVVD NDGHPANIVL
VLEDITEQKR SEEHIRHLAM HDGLTGLPNR RLFMDRLRRS VAMSKRNGVR FAVLFIDLND
FKEINDTLGH EAGDHVLRTV AERLRQSLRE VDTCARIGGD EFIVLLHDIR SNEDLAHASE
RVSAAISTPI NLNGTVRVVS GSIGIAVCPD DATDVDQIIS HADHAMYRCK RNRRYDSASR
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