| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1165 |
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| Symbol | |
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| ID | 3755189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1187881 |
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| End bp | 1190058 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637782035 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_387661 |
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| Protein GI | 78356212 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAGG ATTCCAGAAA AAAACAGCCC GATCTTCCGC CGGACAGTCA GGGGGGTGAG
CACCCGCTCC GTGCCGGACA GGCTATTTCT TCCGGAGCGG CAGATGCAGC GTCCGGAGGG
TCTTCTGCGC CGCAGGAAGA CCTGCAGTAC CGTGATGCGG TGAGCAGCCT GATAGGGTTG
GGCGAAAAGT CGCTGCGCAA GAGTTATTAT CCTGAACTGA GGCGCAAGAT TGCTGAGCTG
GATGTGTTCC GGCGCATGGT TGACCACGCC AGCGATGCCA TGCTGCTGCT GCGGACAGGC
CCGCCTCTTG CCGTCACGCA TCTGAATTCT GCCGCGCGCC GTCTGCTGGG GCCGGGACCG
GAGGAGGGCG GCAGCATTGA TCTGGCGGCG CAGCTGGGCC CCCGTGTGGA AGCCGCGTTG
CTGGCAAGCA GCAAGGGGGG GCGTTCCAAA CGCCTGACGC TGCATGTGCA GCAGGCGGAC
GGAGCCGAAC TGGTGCTCGA AGCCTCGTTT TCGCCCATGC CGTCGGCGGA GGGCGATCCG
GGGCAGGTAA TCATGGTGGC CCGTGATGTG ACAGCGGGGT TCAGGGCCGA ACGTTCGCTG
CGCGAGAGCG AGGAACGCTT CCGCGTGGTC TTTGAGCAGT CCATGCAGCA TGTGGTTGTC
CTTTCTCCCG AAGGTCTTAT TCTGCGCGCC AACCAGAGTC TGCTTTCCGA ATTTGCCATC
TCTTTTGACG ACCTGCGCGG CCAGCGTCTG AGTGATGCTC CGTGGCTGCG CAATATGCCG
GAAATGGCGC GCAATGCCGA ATCGGATGTA AGCAGTGCAT CGGCGGGTGT CAGCGTGCGC
CGGCTGTATC CTGTGCGGCT GCCATCGGGG CAGCTGTTTT TCGACTGCTC TTTCAAACCG
GTGCGTGACG ATGCCGGACG TATTATCCAT GTGGTTGTGG AGGCACGCGA TATTACCGCG
CTGCTGGAGG CAGAGAATGA ATCGCGCATG CTGCGCGGGC TGCTGACCAA TGTGGTGGAT
TCCATGCCTT CGGTGCTGGC TGCGGTTGAC GCCGCGGGCA GGGTCATCCA GTGGAACAGA
GAGGCCGAAC GGCTGACCGG AACATCTGCA CGCGAGGCCA TGGGCCGTCC GGTGGAGGCC
ATGCTGCCGC ATGTGGCTTC GCTGCGTTCG ATGGTGCGCT ACAGCATGGC CGAACAGCGC
CCCATGGCCG AGTCTAAGGT GCCGCGGACG CTGCCCGGCG GAAGGGTCGT TTATGAGGAT
GTGACAGTGT ATCCGTTGTC CACGGGACAT GATCAGGGCG CTGTCATCCG CATTGACGAT
GTTTCGGACA AAGTGCTGAT GGAACAGACC ATGGTGCAGG CGGAAAAGAT GCTTTCCGTC
GGCGGTCTTG CCGCAGGTAT GGCTCACGAA ATCAACAACC CTCTGGGTGC TGTTGTGCAG
GGGCTGCAAA ATGTGTTTCG CCGTCTTGAT CCTGCGGTTG ACCGTAACAG CACTGTGGCG
GCCGCGCTGG GGTGCGATCT GCATGCCATG GATGCATACA TGCGCGAGCG GAAAATATAC
CGTATTCTTG AAGGAATGCG TGAAGCCTCC ATGCGGGCGG CAGATATTGT CCGCAATATG
CTCACCTTTT CCCGCAAGTC GGATATGTCG CGCTCTTCGT GCGATCTGCA CGCCATGATG
GACAGTGTCA TTTCACTGGC AGAAGCTGAC TACGATCTGA AAAAACATTA CGACTTCAAA
AGAATAAAGC TGGTCCGGCT GTACGAGCCC GTACCGCTTA TCGCCTGTAA TAAAACCGAG
GTGGAGCAGG TGCTGCTGAA CCTGCTGCGT AATGCGGCCC AGTCGTTTTA TGCCGTGGGC
ACCATTGCCG GTTCCGGTAC AAAACGGGTG CTGTTGTGCC ATGAACCGGT GATAACGGTG
CGGATACGCA AAGCGGAGCG CTACGTGTAT GTGGACGTGG AGGATAACGG ACCGGGTATG
CCGGAAGATG TGACCCTGCG CGTGTTCGAG CCGTTTTTCA CAACCAAGGC ACCGGGCGCG
GGCACGGGGC TGGGGTTGTC CGTTTCTTAT TTTATCATCA CCCGAAATCA TAAAGGCACC
ATGACGGTGA CATCGGCGCC GGGCAGAGGC AGCTGTTTTA CCGTGGGGCT GCCGCATAAC
GGCAGCACGC CGGAGTGA
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| Protein sequence | MMQDSRKKQP DLPPDSQGGE HPLRAGQAIS SGAADAASGG SSAPQEDLQY RDAVSSLIGL
GEKSLRKSYY PELRRKIAEL DVFRRMVDHA SDAMLLLRTG PPLAVTHLNS AARRLLGPGP
EEGGSIDLAA QLGPRVEAAL LASSKGGRSK RLTLHVQQAD GAELVLEASF SPMPSAEGDP
GQVIMVARDV TAGFRAERSL RESEERFRVV FEQSMQHVVV LSPEGLILRA NQSLLSEFAI
SFDDLRGQRL SDAPWLRNMP EMARNAESDV SSASAGVSVR RLYPVRLPSG QLFFDCSFKP
VRDDAGRIIH VVVEARDITA LLEAENESRM LRGLLTNVVD SMPSVLAAVD AAGRVIQWNR
EAERLTGTSA REAMGRPVEA MLPHVASLRS MVRYSMAEQR PMAESKVPRT LPGGRVVYED
VTVYPLSTGH DQGAVIRIDD VSDKVLMEQT MVQAEKMLSV GGLAAGMAHE INNPLGAVVQ
GLQNVFRRLD PAVDRNSTVA AALGCDLHAM DAYMRERKIY RILEGMREAS MRAADIVRNM
LTFSRKSDMS RSSCDLHAMM DSVISLAEAD YDLKKHYDFK RIKLVRLYEP VPLIACNKTE
VEQVLLNLLR NAAQSFYAVG TIAGSGTKRV LLCHEPVITV RIRKAERYVY VDVEDNGPGM
PEDVTLRVFE PFFTTKAPGA GTGLGLSVSY FIITRNHKGT MTVTSAPGRG SCFTVGLPHN
GSTPE
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