| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1133 |
|---|
| Symbol | rpsB |
|---|
| ID | 3755157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1162165 |
|---|
| End bp | 1162947 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637782003 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_387629 |
|---|
| Protein GI | 78356180 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTACG TAACTATGAA AGGAATGCTG GAAACCGGCG TTCACTTCGG TCACCAGACC
CGCCGCTGGA ACCCCAAGAT GGGTACCTAC ATCTTCGGCG CCCGTAACGG CATCCACATC
ATCGACCTGC AGCAGACCGT AAAGCTGTTC CGCACGGCCC ATGACAAAGT GGTCGACACC
GTTGCACGCG GCGGCAAGGT TATCTTCATC GGCACCAAGC GTCAGGCTCA GGAAGCTGTG
CAGACCGAAG CCGGACGCGC CGGTCAGTAC TACGTGACCA ACCGCTGGAT GGGCGGCACC
CTGACCAACT TCCAGACTAT CCGCAAGAGC ATCGACCGCC TGAAAAAGCT CGAAGTCATG
TTCGAAGACG GCACCGTGAA CCGCTACCAG AAAAAGGAAG TGCTTCGCCT GCGCCGTGAG
ATGGACAAGC TGAATCTGGT TCTGGGCGGC ATCAAAGATA TGGAAAACCT GCCGCAGCTG
GCTTTCATCA TCGACCCCAA CCGCGAAGAC ATCGCCGTTA AGGAATGCCG CCGCCTCGGT
ATTCCGATCG TGGCCGTTAC CGATACCAAC TGCGATCCCG ACCTGATCGA CTACGTCATT
CCCGGCAACG ACGACGCCAT CCGCGCCATC AAGCTGTTTG TCGGCCACAT TGCCGATGCC
TGTCTTGAAG GCGAGGCCAT GCGCAAGGAA ACCAAAGCCG AGAACGCTGA AGAAGCCATG
AAGCAGGCTG CCGAAGCTGA AGCCGAAGCT GCTGCTCCCG CTGCCGAAGA ATCCGCCGAA
TAA
|
|---|
| Protein sequence | MAYVTMKGML ETGVHFGHQT RRWNPKMGTY IFGARNGIHI IDLQQTVKLF RTAHDKVVDT
VARGGKVIFI GTKRQAQEAV QTEAGRAGQY YVTNRWMGGT LTNFQTIRKS IDRLKKLEVM
FEDGTVNRYQ KKEVLRLRRE MDKLNLVLGG IKDMENLPQL AFIIDPNRED IAVKECRRLG
IPIVAVTDTN CDPDLIDYVI PGNDDAIRAI KLFVGHIADA CLEGEAMRKE TKAENAEEAM
KQAAEAEAEA AAPAAEESAE
|
|---|
| |