| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1102 |
|---|
| Symbol | |
|---|
| ID | 3755413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1129409 |
|---|
| End bp | 1131163 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637781972 |
|---|
| Product | high affinity sulfate transporter (SulP) |
|---|
| Protein accession | YP_387598 |
|---|
| Protein GI | 78356149 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor
[TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGG GCATCGCAGC CTTTTTCCCT TTTATGCACT GGCTGCCGGG AGTAACGGCC
CGCACCCTGC GCGCAGACCT TCTGGCAGGT CTCACGGGAG CCATCATCGT TCTGCCGCAG
GGAGTGGCGT TTGCCACGCT GGCGGGACTG CCGCCTGAAT ACGGCATATA CACCGCCGTT
GTCCCGGCCA TCATAGCGGC GCTGTTCGGC TCTTCCATGC ATCTTGTATC AGGCCCCACC
ACGGCCATCT CGCTGGTTAT TTTTTCCAAT GTCAGCACGC TGGCCCCTGC GGGCACACCG
GACTACATAT GCCTTGTGCT CAGTCTCACG CTGATGGCCG GCCTCATCCA GCTGGCGCTG
GGGCTGGCGC GGCTGGGTTC CGTGGTCAAC TTTGTCTCCC ATTCCGTGCT GACGGGCTTC
ACCACCGGTG CGGCCATTCT CATCGCCTCA AGCCAGCTGG GCGGATTTGC CGGTCTGTCC
GTGCCGCGCA GCGGTTTTCT GCCGCGCGAC ATGGCAACGT TCGTCTCCAT GCTGCCGCAG
GCCAGCTGGC ATGCCGTGGC CATAGCCGCA GTCACGTTTG TCACGGCGCT TTTGGTCCGC
CGCGTGGATA AACGCCTTCC CGCCATGCTT ATAGCCATGG CGGCAGGAGG GCTGCTGTGT
CTTGTCATTG ACGGCGCAGC CAACGGAGTA CGCATGGTGG GAGCCCTGCA CGCCGGACTG
CCGCCCTTCT CCGTGCCGGT ATTCGATCCG GAACGGCTGG GCATACTTAT GCCCGGAGCG
CTGGCGGTGG CCATGCTGGG GCTTGCCGAG GCCGTATCCA TTGCCAGATC CGTGGGGGCT
CTTTCGCACC AGCGCATAGA CAACAACCGC GAATTCATCG GTCAGGGGCT GTCGAACATG
GTGGGCTGCT TCTTTTCGGC CTACGCGTCG TCCGGTTCGT TCACCCGCAC GGGTGTCAAT
TACGCCACCG GCGCCCGCAC GCCGCTTTCC GCCATTTTTG CGGCGGTTCT GCTGGTGGGC
ATGGTTTCCG TCATGGGCGG GCTGGCCGCG TATCTGCCGC TTCCGGCCAT GGCCGGTGTC
ATCATGCTGG TGGCGTGGAA CCTCATAGAC ATCGAGCACA TCCGGCGCAT CATGAGCGCG
GGCAGCGGCG AGCCTCTGGT CTTTGCCGTC ACGCTGCTTT CCACACTCAC CGTAAAGCTG
GAATTTGCTC TCATCGCCGG AGTAGCCCTT TCGCTGCTCA TCTATCTGCA CCGTACCATG
CACCCGCACT TCATGCCCAT GGCACCCGTG CTCATAGACG GCATGCGCCA CATAATCAGA
CAGGAAAACC GCAACCTGCC CGAATGCCCG CAGCTTAAAA TACTGCGGCT GGACGGCTCG
CTGTTTTTCG GCGCAGCCGA ACATGTGGCC GAAGAGCTGG AAAATATCGT GGCCGCCAAT
CCGGGCCAGA ACCATATCCT GATCGTTGCC AGCGGCATCA ACTTTATTGA TTACTCCGGC
TGCGAAACCA TCTTTGAAGA ACGCAAACTG CTGCAGGCCG CAGGCGTGCG CCTGTACATG
TGCTCTGCCA ACCCCGGCGT GCGCGCGGCC ATGGAACGGC TGCAATGCGG TCCCATAATT
CCCATATATG AAGACAAGGC GGAAGCCATT GCCACCATCA CCCCCCAGCT GGACATGAAC
CGCTGCGCCG TATGCCGTCT GCGGGTGTTC CACGAATGCG CCGGACTGCC CGGCCCGGAA
ATGACCGCGG AGTAA
|
|---|
| Protein sequence | MKTGIAAFFP FMHWLPGVTA RTLRADLLAG LTGAIIVLPQ GVAFATLAGL PPEYGIYTAV
VPAIIAALFG SSMHLVSGPT TAISLVIFSN VSTLAPAGTP DYICLVLSLT LMAGLIQLAL
GLARLGSVVN FVSHSVLTGF TTGAAILIAS SQLGGFAGLS VPRSGFLPRD MATFVSMLPQ
ASWHAVAIAA VTFVTALLVR RVDKRLPAML IAMAAGGLLC LVIDGAANGV RMVGALHAGL
PPFSVPVFDP ERLGILMPGA LAVAMLGLAE AVSIARSVGA LSHQRIDNNR EFIGQGLSNM
VGCFFSAYAS SGSFTRTGVN YATGARTPLS AIFAAVLLVG MVSVMGGLAA YLPLPAMAGV
IMLVAWNLID IEHIRRIMSA GSGEPLVFAV TLLSTLTVKL EFALIAGVAL SLLIYLHRTM
HPHFMPMAPV LIDGMRHIIR QENRNLPECP QLKILRLDGS LFFGAAEHVA EELENIVAAN
PGQNHILIVA SGINFIDYSG CETIFEERKL LQAAGVRLYM CSANPGVRAA MERLQCGPII
PIYEDKAEAI ATITPQLDMN RCAVCRLRVF HECAGLPGPE MTAE
|
|---|
| |