Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1093 |
Symbol | |
ID | 3755442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1123151 |
End bp | 1123759 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637781963 |
Product | endonuclease-like |
Protein accession | YP_387589 |
Protein GI | 78356140 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase |
TIGRFAM ID | [TIGR00252] conserved hypothetical protein TIGR00252 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAGCCC GCCGCGCCGC AGGCAGCTGT CCCGCGCACA TTGCCGCGGG CCGTCTGGGT GAAGAAGCGG CCTGCGCCTA TCTTGCCGCA TCGGGCATGC GCATTTTGGC CCGCAACTGG CGCGCCGGAC ATCTGGAACT GGATATCATC GCACAGGACA ACGGCACCAT TGTGTTCGCC GAAGTGAAAA CCCGTGCCGC TCGGGGCCTG GAGTCGCCTC ACGAAGCCCT TACTCCGGCC AAACGCAGCA GGCTTGTCAG GGCTGCCGGT ATGTGGCTGT CCAGCAACGA TATGTGGGAC CGCCCTTGCC GCTTTGACCT TGTTTGTGTA ACCACAGAAG CACGCGCACC TGAGCCGGAG CAGATGTCGC TGCAGGCGGC CCGTGCCGCA GGAACCGCTC AGGCCCGCCG CGCCGCAGGT TCCGGACTGC CGGGCATACT GGGCAAAGCT GCATCGCGCC TGTTCGGCGC CGGTTCGCCG CAGCGTTCCC ACCGTGCGGG CGGTGCACCG GATTCTCCGG AACAACTTTT ACGCGTGGAG CATATTCCCC ATGCCTTCGA CCTCTCCGAG TCTCTGGGTG GTGGCGACGC CGCTTGGCAA CCTTGGTGA
|
Protein sequence | MVARRAAGSC PAHIAAGRLG EEAACAYLAA SGMRILARNW RAGHLELDII AQDNGTIVFA EVKTRAARGL ESPHEALTPA KRSRLVRAAG MWLSSNDMWD RPCRFDLVCV TTEARAPEPE QMSLQAARAA GTAQARRAAG SGLPGILGKA ASRLFGAGSP QRSHRAGGAP DSPEQLLRVE HIPHAFDLSE SLGGGDAAWQ PW
|
| |