Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1082 |
Symbol | secA |
ID | 3755431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1111357 |
End bp | 1113951 |
Gene Length | 2595 bp |
Protein Length | 864 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637781952 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_387578 |
Protein GI | 161485608 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGGTT CCATTGTCAA AAAAGTCTTC GGTTCCAAAA ACGACCGTTA TCTCAAATCG CTGAACCACT ACCTGAAAGA AATCAACGCG CTGGAAGAAA ACATCGCCAC CATGCCGGAC GAGGCCATAT CCGCCCGTAT GGCCGAACTG CGCGCCGAAG TGCAGCAGGG CACGTCACTT GACAGCATTC TGCCCGAGGT GTTTGCCATG GTGCGCGAAG CAGGCAAACG CGTGCTGGGA ATGCGCCATT ACGACGTGCA GATGGTCGGC GGCATAGCCC TGCATTCCGG CAAAATAGCC GAAATGCGTA CCGGTGAAGG TAAAACCCTT GTGGCCACGC TGCCCGCGGC TCTCAATGCG CTGACCGGCA AAGGTGTGCA CCTGATCACC GTAAACGACT ATCTGGCCCG CCGTGACGCC GAGTGGATGG GTAAAATCTA CAATTTTCTC GGGCTCAGCG TGGGAGTCAT AGTTCACGGG CTTAACGATG AAGAACGCCG GGCGGCTTAT GCCTCGGACA TCACCTACGG CACAAACAAC GAGTTCGGCT TCGATTACCT GCGCGACAAC ATGAAGTTCT ACAAAGAACA GCTTGTCCAG CGCCCCCATC ATTTCGCCAT TGTCGACGAA GTTGACTCCA TTCTTATTGA CGAAGCCCGT ACGCCGCTGA TCATTTCCGG CCCGTCCGAT GAATCCACGG GGCTGTACCG CCGCGTCAAC GACATCATTC CGCGCCTGAA ACGCGATACA CACTACACCG TGGACGAAAA GGCCCGCGCC GCGGCCCTGA CCGATGAAGG CGTGCAGGAA GCCGAAAAAC TGCTCGGGCT GGACAACCTG TACGACCCGC AGAACATTTC CTTCCAGCAC CACATTCTGC AGGCGCTCAA GGCACACAGC ATATTCACGC GCGATGTGGA CTACATCGTA AAAGACGATC AGGTCGTCAT TGTTGACGAA TTCACCGGTC GACTGATGCC CGGACGCCGC TTTTCAGACG GACTGCATCA GGCGCTGGAG GCCAAGGAAG GCGTAAAGGT GGAAGCCGAA AACCAGACGC TGGCATCCAT CACCTTCCAG AACTACTTCC GCATGTATGA AAAACTGTCG GGCATGACAG GCACGGCAGA CACCGAAGCT GTGGAATTCC AGCAGATATA TGATCTGGAA GTGGTCAATA TTCCCACCAA CAAACCCATG ATACGTAAAG ACCAGCCCGA TTCCATATAC AGAACGCGGC CTGAAAAATT CAACGCCATC GTGGAAGAAA TAGCCAGACT GCACCACAAG GGACAACCTG TGCTGGTGGG CACCATATCC ATTGAAACAT CCGAGCTTAT CGCCGGCATG CTGAAGAAAA AAGGCGTGCC GCACAATGTG CTGAACGCCA AACAACACGA AAAAGAAGCA GAAATCGTGG CAGAAGCAGG TCAGGCGGGC AAAGTGACCA TTGCCACCAA CATGGCAGGC CGCGGTACCG ACATAGTGCT GGGTGAAGGT GTGCCCCAGC TGGGCGGCCT GTACATTCTG GGTACGGAAC GCCACGAATC GCGGCGCATA GACAACCAGC TGCGCGGCCG TTCCGGCCGT CAGGGCGACC CCGGCGAAAC ACGCTTTTTC CTTTCGCTGG AAGATGACCT GCTGCGTCTT TTCGGCTCTG ACCGCATAGC CGGGCTTATG GAAAGACTGG GCATGCAGGA AGGCGAACCC ATCGAAAACA AAATGGTTTC GCGCGCCATA GAAAACGCCC AGAAACGTGT CGAAGGACAC AACTTTGAAA TACGCAAGAC CCTGCTCGAT TATGACAACG TCATGAACCA GCAGCGCGAG GTCATATACA GCCTGCGCCG CGATACCATG ATGGAAGACG ATCTTGAACC TTCGGTCCAT GAGTTTCTCG ACGATATCAT CGAGGACATC TACGCACCGC TGGAGCAGAC CAAAGGCAAA GCCCTCGACG AAGAGACCCA TGCGGCCATC GCCGCCCGGC TTGAAGAAAC CTTTTTCCTT TCACGCGTGT ACCCCGAATT CGCACTCAAG GGTTCGGAAC AGCAGGAAAA GCTTCCGGAA TTGCCTTCCG CGGCAGATGT GAAGAAAGCG GTGGAAAGCA TGCTGGAAAA ACTCAAACGC GATGCAGGGC CGGTCTACGG CGACATCCTG CGCTATTTCC TGCTTGAAGA GCTGGACCGC AACTGGAAAG AACACCTGCT GAACATGGAC CACCTGCGCG ACGGCATCGG CCTGCGCGGG TACGGTCAGC GCGACCCCAA GCAGGAGTAT AAGCGCGAAG GCTTTTCACT TTTCCAGAAC ATGCTCTGGA GCATCAAGGA AAGCGTTTTC CGTGCGCTCA CCCGCCTGCG GCTGCAGCGG GTGGAAGAAG CCGCCGATCC GGCAGAACAG CCCGAAGCCG CGGGTCTGCA GGAAGCAAAA GCCACAGAAC TGCGCCACAA AGAACAACCC GCCGAGCTGT CATATTCCGG CGGTGATGAG GACGGCGCAA AAACCCCTTC GCGGCGCAAC GCCCCGAAAG TCGGCCGTAA TGATCCGTGC CCGTGCGGCA GCGGCAAAAA ATATAAAAAA TGCTGCGGGG CCTGA
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Protein sequence | MLGSIVKKVF GSKNDRYLKS LNHYLKEINA LEENIATMPD EAISARMAEL RAEVQQGTSL DSILPEVFAM VREAGKRVLG MRHYDVQMVG GIALHSGKIA EMRTGEGKTL VATLPAALNA LTGKGVHLIT VNDYLARRDA EWMGKIYNFL GLSVGVIVHG LNDEERRAAY ASDITYGTNN EFGFDYLRDN MKFYKEQLVQ RPHHFAIVDE VDSILIDEAR TPLIISGPSD ESTGLYRRVN DIIPRLKRDT HYTVDEKARA AALTDEGVQE AEKLLGLDNL YDPQNISFQH HILQALKAHS IFTRDVDYIV KDDQVVIVDE FTGRLMPGRR FSDGLHQALE AKEGVKVEAE NQTLASITFQ NYFRMYEKLS GMTGTADTEA VEFQQIYDLE VVNIPTNKPM IRKDQPDSIY RTRPEKFNAI VEEIARLHHK GQPVLVGTIS IETSELIAGM LKKKGVPHNV LNAKQHEKEA EIVAEAGQAG KVTIATNMAG RGTDIVLGEG VPQLGGLYIL GTERHESRRI DNQLRGRSGR QGDPGETRFF LSLEDDLLRL FGSDRIAGLM ERLGMQEGEP IENKMVSRAI ENAQKRVEGH NFEIRKTLLD YDNVMNQQRE VIYSLRRDTM MEDDLEPSVH EFLDDIIEDI YAPLEQTKGK ALDEETHAAI AARLEETFFL SRVYPEFALK GSEQQEKLPE LPSAADVKKA VESMLEKLKR DAGPVYGDIL RYFLLEELDR NWKEHLLNMD HLRDGIGLRG YGQRDPKQEY KREGFSLFQN MLWSIKESVF RALTRLRLQR VEEAADPAEQ PEAAGLQEAK ATELRHKEQP AELSYSGGDE DGAKTPSRRN APKVGRNDPC PCGSGKKYKK CCGA
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