| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1070 |
|---|
| Symbol | |
|---|
| ID | 3755456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1095665 |
|---|
| End bp | 1096312 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637781939 |
|---|
| Product | putative translaldolase |
|---|
| Protein accession | YP_387566 |
|---|
| Protein GI | 161485610 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.144646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTT TTCTCGATAC CGCCGATCTG GACGAAATAC GTCTGGCCGG AAAGCAGGGA
CTTATTGACG GAGTAACCAC CAACCCCACT CTGCTTTCAC GGCAGGGCGG CGACTGGAAA
AAACGCATGC AGCAGATCTG CGACGAGGTC GACGGCCCTG TCAGCCTGGA GGTAATCAGT
CCGGATGCTG AAGGCATGCT GCGCGAAGCG GAAGAACTGG TGCGTTACGG CGATAATGTG
GTCATCAAAG TGCCCATGAC CGCAGAAGGC CTTATCGCCA CCCGCACTCT GACCGGCAAA
GGCATAAAAA CCAATGTGAC GCTGGTTTTT TCGGCCATGC AGGCACTTCT GGCCGCCAAA
GCCGGAGCAA CCTATGTCAG CCCTTTTCTG GGCAGGCTGG ACGGCATAGG GCATGAAGGT
ATGGAGATTG TCAGCCAGAT ACGCACCATT TTTGACAACT ACGGCTACGA AACAAAAATA
CTGGCCGCCA GCATACGCCA CGCCCAGCAC GTGCTGGACA GCGCGCTGGT GGGGGCGGAT
GTGGTCACAG TGCCCTACTC GGTGCTCAGA CAGCTTATGC ATCACCCGCT CACAGATTCC
GGCCTTGATG CATTTCTTGC CGACTGGAAC AAGCTTACGC AGTCGTAG
|
|---|
| Protein sequence | MEFFLDTADL DEIRLAGKQG LIDGVTTNPT LLSRQGGDWK KRMQQICDEV DGPVSLEVIS
PDAEGMLREA EELVRYGDNV VIKVPMTAEG LIATRTLTGK GIKTNVTLVF SAMQALLAAK
AGATYVSPFL GRLDGIGHEG MEIVSQIRTI FDNYGYETKI LAASIRHAQH VLDSALVGAD
VVTVPYSVLR QLMHHPLTDS GLDAFLADWN KLTQS
|
|---|
| |