| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1038 |
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| Symbol | |
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| ID | 3755502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1065339 |
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| End bp | 1066754 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637781907 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_387534 |
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| Protein GI | 78356085 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.200419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCATGA ATCTGGAACA GATACGCGAC GCTCTGGGCG CCGTGGGAAC GCTGGGCGGA
GCGGACATGA CCGTGCCTTC CGGTGTGCAG ACCGACAGCC GGTGCGTGCG CGACGGCGAA
TTGTTCTTCT GCATATCCGG CGAACGGTTT GACGGGCATA CCTTTGCGGC GGAAGTGCTG
GAAAAAGGTG CCTGCGCCGT GGTTGCCGAA AGACCTCCTT TTTCCATGGA CGAAATGCAG
GACAGGCAGG ACCGTCCGGT GCTTATCGTG CCGGACACCG TGGCGGCGCT GGGCAGGCTG
GCGCTGCACC ACCGTATGGG GGCTTCTGCC GTGGTCACCG GCATCACCGG CACCGCGGGC
AAAACCACGG TGAAGGAACT GCTGGCCCAT GTGCTTTCCG TGCGGGGCGC AACAGCCAGA
AATCATCTGA ACAGAAACAA TCAGATAGGG TTGCCTCTTT CCATGCTGGC AGCTACCGGC
GACGAGCGCT TCTGGGTGAT GGAGGCGGGC ATCAGTCAGG CTGCGGACAT GGATGAACTG
GGCAGCGTGC TGCGCCCTGA TCTGGCGGTG GTGCTTAATG TGGGACAGGG GCACCTGAGC
GGTCTGGGCG ACAAAGGCGT GGCCCACTAC AAGGCCCGTC TGCTGAAGCA TATCGCGCGC
GGCGGTGTGG GACTGGTGAG TGCCGATTAT CCCGACCTGC TGGCGGAAGC CCGTAAAAAC
TGCGGAGAAC TGCGGCTGTT TTCGGCTGTG GACCCTGCAG TGCCGTATTT CTGCGAATAT
GCCGGTCCGG CGGGTGAAGG CCGCGGGCTG TACCGTGTAC GGCTGGAAAG CCGCGAATTT
GAGACCGAAG CTCCCTTCCG CGGAGCCTAC GGTGCCGAAA ACGTCATCGC CGTTGCTGCC
GCAGCCCATA TACTGGGCCT GACCAGTGCC GAAATAGCCG AAGGGCTGCG CACTGCCGAA
TTGCCGCAGC AGCGGTTCAA CTGCCGTCGT TACGGCCGGT GGCTGGTCAT TGACGACACC
TATAACGCCA ACCCGCTTTC GGCCGGACGC ATGGTGGAAT CAACGGCGGA AAACGCCTGC
GGAGAGCCTG TGGTCTTTGT GATGGGCGAA ATGCTGGAAC TGGGCGAAGC CGCCGCGCAG
GCTCATACGG AACTCGGCAG AGCACTGGGA AGGGCGTGCC CCGCGGCCGT TTTCTGGAAA
GGCGGCCACG GCGGGCATGT GCAGGAAGGA CTGCACGCCG AGGGCTGGAA CGGCCCGTTT
GTGCCCGTGG CCGATGCAGG AGCGTTTCTG CGTGCTTTCG GTGCGCTGGG CATCGCTTCC
GGCACGGTCT TGTTTAAAGG ATCGCGCAGC AACAGGCTGG AGACGTTTGC CGAAGCCTTC
TGCAGTGCAG TCCAGAACGG TCAGGAAGGG AGATAA
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| Protein sequence | MRMNLEQIRD ALGAVGTLGG ADMTVPSGVQ TDSRCVRDGE LFFCISGERF DGHTFAAEVL
EKGACAVVAE RPPFSMDEMQ DRQDRPVLIV PDTVAALGRL ALHHRMGASA VVTGITGTAG
KTTVKELLAH VLSVRGATAR NHLNRNNQIG LPLSMLAATG DERFWVMEAG ISQAADMDEL
GSVLRPDLAV VLNVGQGHLS GLGDKGVAHY KARLLKHIAR GGVGLVSADY PDLLAEARKN
CGELRLFSAV DPAVPYFCEY AGPAGEGRGL YRVRLESREF ETEAPFRGAY GAENVIAVAA
AAHILGLTSA EIAEGLRTAE LPQQRFNCRR YGRWLVIDDT YNANPLSAGR MVESTAENAC
GEPVVFVMGE MLELGEAAAQ AHTELGRALG RACPAAVFWK GGHGGHVQEG LHAEGWNGPF
VPVADAGAFL RAFGALGIAS GTVLFKGSRS NRLETFAEAF CSAVQNGQEG R
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