| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1020 |
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| Symbol | gatA |
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| ID | 3755522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1043225 |
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| End bp | 1044688 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637781889 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_387516 |
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| Protein GI | 78356067 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00154188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAGA TATACGCACA GACACTTACT GAAACCGCCG CCGCGCTGGC ACAGGGCACA
CTGACAGCCG AAGAGGCCGT CAGAGCATGC ATAGACCGCA TCGAAGCTAC CGAACCGGCA
GTGCACGCGC TGCTGGCCAC CCGCTGCGAA GAAGCGCTGG CCGAAGCCCG GGCCATGGAC
GCCGCGGGTT ATGACCCCGC CAAACCCCTG TGGGGCGTGC CCGTCACCGT CAAGGATGTA
CTGAGCACCA GCGGTGTTGC CACCACCTGC GGCTCGCGCA TACTGGAAAA TTACGTGCCT
TTTTTTGATG CCGCCGCCGT GTCGCGCCTT AAAGATGCAG GTGCCGTCAT TCTGGCAAAG
ACCAACATGG ATGAATTCGC CATGGGGTCT TCCACCGAAA AGTCGGCATT TAAAACCACC
CACAACCCGT GGGACCTGCA AAGAGTACCC GGCGGTTCGT CCGGCGGATC TGCCGCTTCC
GTGGCCGCCG GTCAGTGTTT TGCATCGCTG GGTACCGATA CCGGCGGCTC CGTGCGCCAG
CCTGCCTCCT TCTGCGGATG CGTGGGGCTG AAGCCCACAT ACGGCCGCGT TTCACGCTAC
GGGCTGGTGG CCTATGGTTC TTCGCTGGAC CAGATAGGTC CTGTCACCCG CAGCGTGGAA
GACGCCGCCA GAGTGCTTGC CGTCATTGCC GGACACGATG CCCGCGACAC CACATGTTCC
GACAGACCGG TGGATGATTA TCTGGCCGCT CTCGGCTCCC GCAGCGACCT TGCCGGACTC
CGTATAGGCG TACCGGCGGA ATACTGGGGT GAAGGACTTT CCGGCGAGGT GGATTCCTGC
TGCCGTGAAG CCCTGAAAAA AGCCGAAGAA CTGGGTGCCA CTCTGGTCGA CATATCCCTG
CCGAACAGCC GGCACGCCAT TGCGGTGTAC TACATCGTGG CCATGGCCGA AGCCAGCTCC
AATCTGGCCC GCTTCGACGG GGTGCGTTTC GGGCACCGCT CGGACAACGC GGCTTCACTG
CCCGAACTGT ACATAAACTC CCGTTCCGAA GGATTCGGCG ACGAAGTGCA GCGCCGCATC
ATGCTGGGCA CCTATGTGCT TTCTTCCGGC TACTACGATG CGTACTACCG CAAGGCCGCG
CAGGTCCGCA GGCTTATTCT GCAGGATTTT GAAAAAGCCT TTGAGCAGTG CGATGTCATC
TGCGGCCCTG CTTCGCCCGT TACAGCATGG AAACACGGAG CCATGTCCGG CGACCCCCTG
ACCATGTATC TGCTGGATAT TTTCACCATA TCTCTCAACC TTGCGGGGCT GCCCGGTCTT
TCTCTGCCTG TGGGTACGGG AACGGAATCA GGCATGCCTG TGGGGCTGCA GATTCTGGGC
AAGGCCTTTG ACGAAGCTAC ATTGCTCTCT GTGGCCCATG TGCTTGAACA ACGCATAGGC
CGCACCCCCG TGGCACAGAT ATAA
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| Protein sequence | MAQIYAQTLT ETAAALAQGT LTAEEAVRAC IDRIEATEPA VHALLATRCE EALAEARAMD
AAGYDPAKPL WGVPVTVKDV LSTSGVATTC GSRILENYVP FFDAAAVSRL KDAGAVILAK
TNMDEFAMGS STEKSAFKTT HNPWDLQRVP GGSSGGSAAS VAAGQCFASL GTDTGGSVRQ
PASFCGCVGL KPTYGRVSRY GLVAYGSSLD QIGPVTRSVE DAARVLAVIA GHDARDTTCS
DRPVDDYLAA LGSRSDLAGL RIGVPAEYWG EGLSGEVDSC CREALKKAEE LGATLVDISL
PNSRHAIAVY YIVAMAEASS NLARFDGVRF GHRSDNAASL PELYINSRSE GFGDEVQRRI
MLGTYVLSSG YYDAYYRKAA QVRRLILQDF EKAFEQCDVI CGPASPVTAW KHGAMSGDPL
TMYLLDIFTI SLNLAGLPGL SLPVGTGTES GMPVGLQILG KAFDEATLLS VAHVLEQRIG
RTPVAQI
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