Gene Dde_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1003 
Symbol 
ID3755538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp1027531 
End bp1028091 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content55% 
IMG OID637781870 
Productmethionine sulfoxide reductase B 
Protein accessionYP_387499 
Protein GI78356050 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCTGCC TGCCCGTACC ATTCTTTCCT CCTCGGATTC TGGACTTACC GACCCGCGTG 
CTTATTGCCA TAGAGTATAC GCATCACCCC CTAGCACCGC AGGAGAATCC CATGCCGCAA 
AAATACCGCA AAACTCCGGA GGCACTGGCC GCACTGACAG ATGAGCAGCG CAGGGTAACG 
CAGGAAAACG GCACTGAACG TCCGTTCAGC AACGCTTTTC ACGACCACAC CGCAGCAGGA 
CTGTATGTGG ACATCGTTTC CGGCGAACCG CTGTTTTCAT CACTGGATAA ATTTGATTCC 
GGCTGCGGGT GGCCCAGCTT CAGCAGGCCT GTGGAACTGA ATATAGTGGA GAAAAAAGAT 
ACAAGTCATG GTCTTGTCCG CACAGAAGTA CGCTCGAAAC ATGCGGACAG TCATCTGGGA 
CATGTGTTCA CAGACGGGCC GGAGCATCTG ACAGGCCTGC GGTACTGTAT CAATTCAGCC 
GCACTGCGTT TTATTCCGGC GGACAAGCTG GAAGAGGAAG GGTACGGCGA ATATGCACAC 
CTTTTCACCA CACGGGAGTA G
 
Protein sequence
MPCLPVPFFP PRILDLPTRV LIAIEYTHHP LAPQENPMPQ KYRKTPEALA ALTDEQRRVT 
QENGTERPFS NAFHDHTAAG LYVDIVSGEP LFSSLDKFDS GCGWPSFSRP VELNIVEKKD 
TSHGLVRTEV RSKHADSHLG HVFTDGPEHL TGLRYCINSA ALRFIPADKL EEEGYGEYAH 
LFTTRE