| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0999 |
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| Symbol | |
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| ID | 3755534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1024300 |
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| End bp | 1026375 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637781866 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_387495 |
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| Protein GI | 78356046 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCGCC ACATGTGCCA CAGGGCGGCA TACGGTTCAA GCGGACGGCA GCCGCGCAGG
CACATTGACT TTACCGGCCG CTGCCCGCAT TCTGCGGTAA TGCATACTCT CTTTGTACCG
GCCCACGGGC CGCGCCGCCT GCCGGACGGC AGCTGGCTCT TCCGGCTGTG GACCACACGC
CGCAAGCCCG CAGTACTTGT CATCGAAGCG CCCTGCCCGC AGGAAATTCC CATGAAAGCG
TGCGGAGGCG GCTGGCGGGA AGCCAGAACA GCCCCCATGC CCGCCGGTGC GCTCTACCGC
ATCCGGCTGG GGGACGAGCT GCTGGCAGAC CCGGCTTCCG CCCATCAGCC GCAAGGTATT
GACGGCCCTT CCATGACGGA CGACCCGGCC GCTTTCATCT GGACCGACAG CGGTTTCGGT
GCGGTAGCCA TGCCTCACGC GGTCATCTAC GAAATACATA CCGGCACGTT CACCCCCGAA
GGTACACTGG ATGCCGCCGC CGGACGCCTG CCCCGCATTG CTGAACTGGG CGTGACCGCC
GTGGAACTGA TGCCCCTGAC GGAAACCACC GGACGCTGGA ACTGGGGCTA TGACGGTGTG
TTTCCCTACA GTATCCATCA CCGTGCGGGC GGTCCCGATG CACTGCGCCG CTTTGTGGAT
ACGGCCCACG GGCTGGGTCT TTCAGTGTAT GGCGACGTGG TGCTCAATCA TCTGGGACCG
GAGGGAAACA ACCTGCCGAA ATTCGGCCCC TACCTTTCCC GCCGGCACCA CACTCCGTGG
GGGGCCTGCC CTTCATTTGA CGGAGCATCC GCTCAGGCCG TACGCCGTTA TTTTCTGGAC
TGCTGTCTCA GACTCATGGC GCATTTTCAT ATGGACGGGC TGCGGCTGGA CGCCACCCCG
TATGTGCAGG ACGATTCCGC AGAGCATATT CTCGCCGCAC TCACGCGGGA AACGCAGGTG
CTGGCCGCCG CCTCAGGCAG GCGGCTTCAT ATCATGGCGG AAAGCACCCG CAACGAAATA
CACCTGACCA CACCACGCAG CGCCGGTGGC TACGGCATGG CCGCACAATG GAGTGACGAC
TTTCACCACG CAGTACATGC CCGGCTTACC GGCGAATCCT GCGGGTACTA TGCGGCGTTC
CACACCGCGC AAAACCCTGC AAAACCGGCA CAGACCCCGC CTGCAGCAGG GCAGCAAAGC
AAAGAAGCTC AGAAACGGTG CCCCCCGGCA GCGGCTGTCA GCCCTGTGGA CGCGCTGGCA
GAAATATTCG TCCGCGGCTG GTTCAGGCAG GGGCAGCTGT GCCCGTGGCG CAAGCAACCT
TTCGGAGACC AGCCCCGCGG TCTGCAGCCT TCACAGGTCA TTGTCTATCT GCAGAACCAC
GATGTCACGG GCAACCGTCC CTCGGGCGAG CGTCTGCACG CGCTCACCTG TCCTGCAGCC
CGGCGCATGG CCGCTGCAGC CCTGCTGCTT TCACCTTTTG TTCCGCTGAT TTTCATGGGA
GAAGAATACG ATGATCCGGC CCCCTTCCAC TTTTTTGTGG ATCACAGCCC GGAATTGAAC
CGGCAGGTGG CACAGGGCAG ACGGCGCGAA GCAGCGGCCT TTGGCTGGAT GCCGTGCGCC
ACGGCACCGG AACCGCATTC ACCGGCCGCT TTTGAAAACT CGCGGCTGTC ATGGCACCTG
CAGGACACCC GGTATCATGC CACTGTCCGC GACCTGTACC GGCGGTGCAT ACGGCTGCGG
CAGACCCTGC CCTCGCTGGA CAGCCCTTCA TTTGAGACTC TGTATGTAAG CAGACCCCAT
CCGCAGGTCA TCTGCACCGG CAGAACCGAC CCCGCGAGGA TTTACAGCTC GTGGCTGCTG
CTCAACTGCG GACCGCAGGC AGCCACGTTC AGCATTGACG CCGCCACGGC CCCGCTGGCC
CGCCAGCAGG CGTGGAGTCA GGCACTGTGC ACGGCCGACC GCCGCTGGCA CAGTCCGCAT
ACACAGGAAG ATGAGGCAGA CCTGCCCCAC CGCTTTGCCG CGGGAACACA CATACCGGTC
ACTCTGCCGC CGTGGTGTGC GCTGCTTCTG GCCTGA
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| Protein sequence | MYRHMCHRAA YGSSGRQPRR HIDFTGRCPH SAVMHTLFVP AHGPRRLPDG SWLFRLWTTR
RKPAVLVIEA PCPQEIPMKA CGGGWREART APMPAGALYR IRLGDELLAD PASAHQPQGI
DGPSMTDDPA AFIWTDSGFG AVAMPHAVIY EIHTGTFTPE GTLDAAAGRL PRIAELGVTA
VELMPLTETT GRWNWGYDGV FPYSIHHRAG GPDALRRFVD TAHGLGLSVY GDVVLNHLGP
EGNNLPKFGP YLSRRHHTPW GACPSFDGAS AQAVRRYFLD CCLRLMAHFH MDGLRLDATP
YVQDDSAEHI LAALTRETQV LAAASGRRLH IMAESTRNEI HLTTPRSAGG YGMAAQWSDD
FHHAVHARLT GESCGYYAAF HTAQNPAKPA QTPPAAGQQS KEAQKRCPPA AAVSPVDALA
EIFVRGWFRQ GQLCPWRKQP FGDQPRGLQP SQVIVYLQNH DVTGNRPSGE RLHALTCPAA
RRMAAAALLL SPFVPLIFMG EEYDDPAPFH FFVDHSPELN RQVAQGRRRE AAAFGWMPCA
TAPEPHSPAA FENSRLSWHL QDTRYHATVR DLYRRCIRLR QTLPSLDSPS FETLYVSRPH
PQVICTGRTD PARIYSSWLL LNCGPQAATF SIDAATAPLA RQQAWSQALC TADRRWHSPH
TQEDEADLPH RFAAGTHIPV TLPPWCALLL A
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