Gene Dde_0984 details

Gene Information

• Locus tag: Dde_0984
• Symbol: atpC
• ID: 3755556
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: -
• Start bp: 1010563
• End bp: 1010967
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637781851
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_387480
• Protein GI: 78356031
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.111243
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGT CTCTCCAGCT TGAAATCGTG ACACCGGACA AGGTGGTCCT GAGCGAGCAG 
GTGGACTATG TCGGCGCCCC TGGATACGAG GGTGAGTTCG GCGTACTGCC CAACCACATC 
CCGTTCCTTT CGGCTCTGTC CATCGGCAGC CTGTACTACA AGGCCGGCGG CAAAACCAGA 
TACGCCTTTG TTTCCGGCGG CTTCGCTGAA GTTTCCGACA ACAAAGTGAC CATTCTGGCC 
GAATCCGCTG AACGTGCCGA AGACATCGAC ATCGAACGCG CACGCAAGGC TCAGCAGCGC 
GCTGAAGAGC GCCTGAAAGC CGAACGTGAA AAGATCGACG CCACCCGCGC TGAAGCCGCC 
CTGAAGCGTG CTCTGGCCCG CCTTCAGGTA CGCAATGCAG CCTAG 

 

Protein sequence

MEKSLQLEIV TPDKVVLSEQ VDYVGAPGYE GEFGVLPNHI PFLSALSIGS LYYKAGGKTR 
YAFVSGGFAE VSDNKVTILA ESAERAEDID IERARKAQQR AEERLKAERE KIDATRAEAA 
LKRALARLQV RNAA