| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0978 |
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| Symbol | |
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| ID | 3755550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1005754 |
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| End bp | 1007337 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637781845 |
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| Product | phosphodiesterase |
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| Protein accession | YP_387474 |
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| Protein GI | 78356025 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0108049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATAA AAGGGAGTCG AGGCATGGGC CTTATAGAAA TAGTACTCCT CCTCGTCGGC
ATGGCAGTCG GGGCAGCCAC AGGCTTCATA CTGCACAAAA TAGTCAGCGC CAAACGTCTG
CAGGACGCCC GCGAACTGGC CGACCGCATT ATCGAGGAGG CACGCAAAGA GGCACAGGCG
CACAAAAAGG AAGTGCTCAT CCAGGGGCAG GATGAACTCT TTAACCAGAA ACGTGAACTC
GAACGCGAAT TTAAAGAACG CGAACACGAA CTGAAAATCC GTGAACGCAG GCTGCAGGAA
CAGACCGAAC GGCTTGAAGA AAAACTGGAA AAGCTGGCCC AGAAAGAACA CGATGCTCTT
TCTGTGGAAA AAGAACTGAA CAGGCGCGAA CGCACTCTGG GGCTTAAGGA AGAGGAACTG
ACCCAGAAAA TTGCGGAGCA GGATAAAAAG CTTCAGGAAA TATCCGGTCT GACATCTGAA
GAAGCCAAGG CGCGCATTTT CAGCGAAGTG GAGGCAAGAA CCCGCCACGA AGCCGGAAAG
ATGATCCGCG TCATAGAAAC AGAAGCCAAG GAGACCGCTT CGCGCAGTGC CCAGAAAATT
CTGGCCACAG CTGTTCAGCG GTATGCCGGC GACTTTGTCA ACGAACAGAC CGTTACCGCA
GTCTCGCTGC CCAGCGAAGA CATGAAAGGC CGCATCATAG GCCGCGAAGG ACGCAACATC
CGTGCGCTGG AAGCAGCCAC CGGCGTTGAT CTGATCATTG ACGACACTCC GGAAACGGTC
ATCCTTTCCG CCTACAGCCC TCTGCGCAGG CAGATTGCCA AAATGGCACT GGAAAGGCTG
ATCAGCGACG GACGTATCCA CCCCGCACGC ATTGAAGACA TTGTACGCAA GTGTGAGCAG
GAGCTGGAAG TGCAGCTGCG CGAAGTGGGC GAACAGGCTA CCTTTGACGT GGGCGTGCAC
GGCATACATC CCGAAATCAT CAAACTGCTG GGGCAGCTCA AATACCGCAC CAGCTTTTCG
CAGAATGTGC TTCAGCACTC CATGGAAGTC GCATCGCTGT GCGGCATTAT GGCTGCAGAA
CTGGGCATGG ACGAAAAACG CGCCAAGCGC GCGGGGCTGC TGCACGACAT CGGCAAAGCA
GTGGACCACG ATGTGGAAGG TCCGCATGCC GTCATCGGAG CCGATCTGGC AAAGAAATAC
GGCGAATCCA AGGACATTAT CCACGCCATA GCAGCCCACC ACGAAGATGT GCCGCCCAAA
AGCGCTCTGG CTGTGCTGGT GCAGGCCGCA GACAGCCTTT CCGGTGCACG CCCCGGTGCG
CGCAAGGAAT TGCTGGAAAA TTACGTGAAG CGGCTTGAAG ACCTTGAAGG TATAGCCAAC
GGCATGGAAG GGGTTTCCAA AGCCTACGCC ATTCAGGCAG GCCGCGAAAT CCGCGTTCTT
GTCAATTCCG ATGAAGTTGA CGACGACACA ACATACATGC TGTGCAAAGA CATCTCGGAA
AAAATCGAGA AAAACCTCAC CTATCCCGGC CAGATCCGCG TTACCGTCAT CCGGGAACGC
CGCGCCGTGG GTGTGGCCAA ATAG
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| Protein sequence | MTIKGSRGMG LIEIVLLLVG MAVGAATGFI LHKIVSAKRL QDARELADRI IEEARKEAQA
HKKEVLIQGQ DELFNQKREL EREFKEREHE LKIRERRLQE QTERLEEKLE KLAQKEHDAL
SVEKELNRRE RTLGLKEEEL TQKIAEQDKK LQEISGLTSE EAKARIFSEV EARTRHEAGK
MIRVIETEAK ETASRSAQKI LATAVQRYAG DFVNEQTVTA VSLPSEDMKG RIIGREGRNI
RALEAATGVD LIIDDTPETV ILSAYSPLRR QIAKMALERL ISDGRIHPAR IEDIVRKCEQ
ELEVQLREVG EQATFDVGVH GIHPEIIKLL GQLKYRTSFS QNVLQHSMEV ASLCGIMAAE
LGMDEKRAKR AGLLHDIGKA VDHDVEGPHA VIGADLAKKY GESKDIIHAI AAHHEDVPPK
SALAVLVQAA DSLSGARPGA RKELLENYVK RLEDLEGIAN GMEGVSKAYA IQAGREIRVL
VNSDEVDDDT TYMLCKDISE KIEKNLTYPG QIRVTVIRER RAVGVAK
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