Gene Dde_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0960 
Symbol 
ID3755571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp984363 
End bp984983 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content51% 
IMG OID637781827 
ProductTetR family transcriptional regulator 
Protein accessionYP_387456 
Protein GI78356007 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.462033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATG AGAAGCTCCC ACGTCGGGAA AGAGAAAAAC GCAGACATCG TCGGCAGATG 
CTTGCCGCTG CACTCGAGCT TTTCTCGAAG AAAGGATACC ACAACGTATC CATGCACGAG 
ATTGCAGAAA GAGCAGAGTT TGCCATCGGA ACGCTTTACA AATTCTTCAA GAACAAGGAG 
CACCTCTACA AGGCCCTCAT GATGGAAAAG GCAGCGGAAT ATCATCATAC CCTGAGCGGA 
GTCCTTTCGA GGGAAGGTGA CGTCCTGACT ATTCTCAAAG ACTACATTTC CGCTAAAGCG 
GGGATCTTTG CCGATGACGT TGCCACGTTG CGGCTCTATT TTGCTGAAAC GCGGGGTGCG 
AGTTTCAACA TCAAGGCCGG TCTCGATCAG GACATTCGCA AGCTTTATGA CGAACTGGTA 
GAGCAACTGG CTTCGACACT GGAAAAAGGT ATTCGCAAAA ACGTGCTTCG CGATCTGAAC 
CCCTACTATA TGGCCGTGGC CCTGGAGGGA ATCACCAACG CTTTTCTCTT CTGTTGGCTG 
GAAGATCCGG AACGGCATTC ATACAAGGCG AATGCCCCGG TGATCAGTGA CATGTTTCTC 
AAAGGGGTGA TGGCCGAATG A
 
Protein sequence
MQDEKLPRRE REKRRHRRQM LAAALELFSK KGYHNVSMHE IAERAEFAIG TLYKFFKNKE 
HLYKALMMEK AAEYHHTLSG VLSREGDVLT ILKDYISAKA GIFADDVATL RLYFAETRGA 
SFNIKAGLDQ DIRKLYDELV EQLASTLEKG IRKNVLRDLN PYYMAVALEG ITNAFLFCWL 
EDPERHSYKA NAPVISDMFL KGVMAE