Gene Dde_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0946 
Symbol 
ID3755596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp970604 
End bp971521 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content62% 
IMG OID637781813 
ProductPhage baseplate assembly protein W-like 
Protein accessionYP_387442 
Protein GI78355993 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00423379 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTACG ACTTTCTCGG CAAGGGGCTG CGTTACCCGT TCCGGTTTCA GTCGGTATCC 
GGCGGCACCC AGATATCGAC CGCCACCTCC CGTGAGCACG AGCATATCCG CGAAAGCATC
CTGCAGATCC TCGGCACCCG GATCGGCGAA CGGTTCATGA ATCCAGAGTT TGGCTCCCGG
CTGAAGGATC TGGTTTTCGA ACAGAACGAC GAGGTGCTCA AGGGCCTGCT GCGCCACTAC
GTGATCGACG CCATCAAGCG CTGGGAAAAG CGGGTGATCA TCACGGAGGT ACACTTCGAC
GACCGGCCGC TGAACATCGA CGGCAACCTG CTGCTGGTGC ATATCGCCTA CCGGGTGATC
CAGAGCCAGG TGGACGGCAA CCTGGTCTAT CCCTTCTACA GAGAAGACCC GAACAATCCC
GCACCCAGCT ATCCCCAGCC GGAGCCCGAG CCAGAGCCGC CGCCGGTGCG CAGCGTGCGC
CTGTCGCCGG ACGTGCGCAC GCTGTTCAAT CTGCTCTGGT TCGACGCGGC CGAAATGAGC
CCCGATCCGG ACGACTCCTT GATCTGGCCA GCCGGGGAAT ACGAAGTCGC CTACATCGAG
GGAGCCTTTC AGGACCGCAA CGGCAAGTGG ATCGTCAGCG ATCCGGGTGA CAACCACGGC
CATTACCTGA CGTTCGAGGG AGCGCCAGAA ACAGAAGCGC CCCAGGCCGA GCACGCCCTC
TATCTGGCCG CGAGCGGTCT GGGCTTCGAC ACCCAGAGTC AGGCGGAAGA CAACGCCGCT
GGCACCGTTC ACCGGATCAC CACCCTGGAG CCGGGCCGCA TCGGTCTATT CTATTTCGAG
GGCAAGAAGG AATCCCACTA CCTCAACAAC ACCTCTGGGC AGCCCAATCC CGTCTGGCAA
CTGCGCGGCC CGCTCTGA
 
Protein sequence
MSYDFLGKGL RYPFRFQSVS GGTQISTATS REHEHIRESI LQILGTRIGE RFMNPEFGSR 
LKDLVFEQND EVLKGLLRHY VIDAIKRWEK RVIITEVHFD DRPLNIDGNL LLVHIAYRVI
QSQVDGNLVY PFYREDPNNP APSYPQPEPE PEPPPVRSVR LSPDVRTLFN LLWFDAAEMS
PDPDDSLIWP AGEYEVAYIE GAFQDRNGKW IVSDPGDNHG HYLTFEGAPE TEAPQAEHAL
YLAASGLGFD TQSQAEDNAA GTVHRITTLE PGRIGLFYFE GKKESHYLNN TSGQPNPVWQ
LRGPL