| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0878 |
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| Symbol | |
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| ID | 3755642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 906511 |
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| End bp | 909033 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637781744 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_387374 |
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| Protein GI | 78355925 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00403234 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTGC GGGGGGCTTC TTTCGCGGCT GAGGCGCAGT CAGAAAAAAG TCTTCCGGCA
ATTACAAAAG GCGGCAGCTC CGGACACGCA ATGCATATTC ACAAACCCAC AAGCCTTCAG
GCAAAATTTT TATCCGGTCT CGCCGTCGCG TGCCTCACTC TGGGCGTTCT TTTTGCGGGC
GGGTTCTACA TTCACATGCG CAATGTGCTG GAAGAAGAGG TGCGCGACAA AGCGCGGCTC
ATCTTCACCC ATGTGGATTC CATTCAGAAT TATGTGCGGC AGGTGCTGCG CCCCACCATG
TACGAACAGC TGCCCGACAC GTTTGTCATT CAGGCCATGT CGTCGTCCTT TGTTTCCCGC
AGCGTCATGA GCCGTCTTAA TAACGGGCCG GACGGCACCA TATACCGCCG TGTGGCCATA
GATGCACGCA ATCCCGAATA CGAAGCCAAC GAAAGAGAAC TGGAACTCAT CGATTACTTC
AGGGGCCATC CGGAAAGCGG CATCTGGCGC GGATATAAAA ATATCAACGG CGACCGCTAC
TATGTGATGG CCCGGCCGGT GCGCTTTGTT GAAAGCTGCA TGTACTGCCA CGGCGAACCG
GCGGATGCCC CTGCCGACCT TGTGCGCATG TACGGCAACA GAGGATTCGG CAAGGAACAG
GATTCCATTG CCGGTGTCGA CTTTGTGGGG CTGTCCGTTG ACGGCAGCGT TGGGCGCCTG
CAGCGCACCA TCCTGACGTA TTTTGTTTTT TTCACGGTCG GAGCCGTTAT CTTTTTTTCC
ACGACAAACC TGCTTTTCAA GGTGCTGGTG GTCAACAATC TTAAGCGCCT GACCAATGTG
TTCCGGCGCA ACGTGGCCGA TGCCGAGGGC AGCGCCCTGC TGCGCAAACT GGAACAGGGT
GACGAAATAG AAGAGCTGGT GGAAGGGATG GAACAGATGG GCGAGCATCT GTACGAGGCC
CGCAGCCAGC TGCAGCTGTA CGCAGAGAAT CTGCGCGGCA TGGTTGACCA GCGCACGCAG
GCGCTTTCGC GCGAGGTGGA GGCCCGCAGG GCCGATGTGG CTCTTTTTGT CAGCCTGCTG
TCTGATATGC GCAGCAGCAC GTCGCGCGCC GACCTGTGGC AGCTGGCGCT GCCTCAGATA
TGCCGGCGGT TCAGAGCGCG GCGCATTGCC TATGTGTGCA CCATGGCCTC TCAGAATTAT
TTTTCGTGGC CGGAAAACAT GGGCCGGCCC GAACTGCCGG ATGACCTCGT GGGGGTGCTT
ACATCCGGCG CCTGTGTGGT GCTGGGTAAC AAAGCCTACA TTCCGGTGGA ATCAAGCGTT
GGTAATGCTG AAGGTATCCT GTGCCTTTTC TGGGATACGG ATGCCGAAGC CAACACCCAT
GACCGGGCAG TGCTGCAGGC ACTGGGCAGA CAGCTGGGCA CCGTGGCGGA AAACATGACC
GCCATAGACA GCCTGATGCG GCAGATGAAC GTGCTGCAGA CCATTGTGGA AGGCATAACA
GACCCTCTGG CGCTCATGGA TTCCAACTGC GCTGTGCTTA CTGTGAATGA GGCCGCGCGC
AAACTGACTG CCGAACTTAC GGGCGGCAGG CGTTCCGACG GCAACCTGCT GCCGCTCTTT
TTCGGGGCGG AACTGGATCA CTGCCCCATG GTGGATGCCA TCAAGCGTGG TACTCCCGAC
CTGCGCGAAG AAACTCTGCC GTGTGGCCGG TCGTTTTCTC TGTCCATGTA TCCGGTGCGC
GCAAAGGATG GCACAACAGG TCGTGTTGTT GTGTATGTGC GTGAAACCAC AATGGAAAAA
AGGATGATGG TGCAGGTGCG CCAGTCTGAA AAGATGGCCA CCGTGGGCAA ACTGACTGCG
GGGCTGGCAC ATGAAATCAA CAACCCGCTG GGTGTCATTC TGTGTTATGC CGAGCTGTTG
CGGCAGAACA TAAGCGATCC TCAGCAGGGG GCCGACCTTG ATGTCATTGT GCGACATACC
AGACAGGCGC AGCGGGTGCT GCGTGATCTG CTGAATTTTG CCCGGCCCAA GGCCGCGGGG
TCGGGACTGG CCGATGCCTG TGCCGTTGCC GGTTCCGTCA CGGAAGTGTT TTCTGTGCAG
GCCATGAAAA AAGGGGTGAC ACTGTCTTTG CAGTGTCCGT CCGATCTGCC GCGGGTGCGT
ATAGGTTTGA ACGAACTGGA GCAGGTACTG GGCAATCTGG TGATAAACGC GCTGGATGCC
TGTCCCGATG CAGACGGCGA GGTGCTTGTG CGCATTTCCC CGCGCAGCGG CGGCATGATT
GCCATCGAGG TGGCGGATAA CGGGCCGGGT ATTCTGCCTG ACGATATGTC CCATGTGTTT
GACCCGTTTT TCTCAACCAA GGAGACAAAC GCCGGTACCG GACTGGGATT AACGGTTGTG
TACGGCATGA TTACCGATGT CGGGGGCACG GTGGAAGCCG GAGCTTCTGC CGAACTGGGC
GGCGCGCTGT TTACTGTGCT GCTGCCTGCC GAAGACGGAC CGGAAACGGA CGGCGCGGCG
TAA
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| Protein sequence | MAVRGASFAA EAQSEKSLPA ITKGGSSGHA MHIHKPTSLQ AKFLSGLAVA CLTLGVLFAG
GFYIHMRNVL EEEVRDKARL IFTHVDSIQN YVRQVLRPTM YEQLPDTFVI QAMSSSFVSR
SVMSRLNNGP DGTIYRRVAI DARNPEYEAN ERELELIDYF RGHPESGIWR GYKNINGDRY
YVMARPVRFV ESCMYCHGEP ADAPADLVRM YGNRGFGKEQ DSIAGVDFVG LSVDGSVGRL
QRTILTYFVF FTVGAVIFFS TTNLLFKVLV VNNLKRLTNV FRRNVADAEG SALLRKLEQG
DEIEELVEGM EQMGEHLYEA RSQLQLYAEN LRGMVDQRTQ ALSREVEARR ADVALFVSLL
SDMRSSTSRA DLWQLALPQI CRRFRARRIA YVCTMASQNY FSWPENMGRP ELPDDLVGVL
TSGACVVLGN KAYIPVESSV GNAEGILCLF WDTDAEANTH DRAVLQALGR QLGTVAENMT
AIDSLMRQMN VLQTIVEGIT DPLALMDSNC AVLTVNEAAR KLTAELTGGR RSDGNLLPLF
FGAELDHCPM VDAIKRGTPD LREETLPCGR SFSLSMYPVR AKDGTTGRVV VYVRETTMEK
RMMVQVRQSE KMATVGKLTA GLAHEINNPL GVILCYAELL RQNISDPQQG ADLDVIVRHT
RQAQRVLRDL LNFARPKAAG SGLADACAVA GSVTEVFSVQ AMKKGVTLSL QCPSDLPRVR
IGLNELEQVL GNLVINALDA CPDADGEVLV RISPRSGGMI AIEVADNGPG ILPDDMSHVF
DPFFSTKETN AGTGLGLTVV YGMITDVGGT VEAGASAELG GALFTVLLPA EDGPETDGAA
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