| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0865 |
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| Symbol | |
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| ID | 3755665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 892249 |
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| End bp | 894927 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637781730 |
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| Product | CRISPR-associated helicase Cas3 family protein protein |
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| Protein accession | YP_387361 |
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| Protein GI | 78355912 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCTC GAGTTTCAAA TGATTCCTAT TACGGCTATT GGGCAAAATT CGACAGAAAC
ATTGCGCCAT ACGTTCACTT ACTCCCCTAC CATCTGCTGG ATGTAGCCGC AGTATATGAC
TCACTTCTCA ACCACACCCC GGTGTTGCAA CGACGAATCT GCAGGCTCTC GCAGCTTTCC
CCTGATACTA TACGGGCATT ACTCCGCACT CTTGCCGTCC TGCACGATCT GGGTAAATTT
TCCCAGATCT TTCAGGAGCA ACAGCCGGAA GCCCGGGCTA TACTGACAGA CACACCGCCC
ACCGGCCTTG GCGGCAACAC ACACCACACA GCGTTGGGGC AATGGCTCTA CTCTTCCGTT
GTCCGTCAGG CACTTGAAGA CTGTCATGCG GTTTTTTCCG AAGACGCCAT GGACACCATG
CGCCCCCTTG TCAATGCCAC CTTCGGACAT CACGGAACAC CGGAGCAGGA ATCAGGCTCC
ATACGCCACT TCCGGCGTGC AACAGAACAT GCCAAGGCTT TTGCCACCGA AGCTGCAAAC
TTTCTGCTGC CGCCCATAGA AATTCCCGAA AGTGAACAGG CCTTCCGCGC TCTATCATGG
CTTCATGCGG GGCTTATGGT CGTGGCTGAC TGGCTCGGCT CAAATACCCG CTGGTTTCCA
TACCATGCGG AACAAATGCC TCTGGAAACA TATTGGAACG AAATAGCGCT GCCTCGTGCT
GACCGTGCCG TGCGTGAATC CGGTATTCCG GCAGCCCCAC CGCACCCGAA GCGAGACTTC
ACCCGTCTGC TCCCCCACCT GCCGGCAAAT GCCGGGCCGA GCCCGCTGCA GTCCCATGCC
CTGTATGATG CCATCCGGAG CAGCGGCCCT CAGTTGCATA TATTTGAAGA CATGACCGGA
GGCGGCAAAA CAGAGGCAGC CCTGCTTTGC GCTCACGGAC TCATGACCAT GTCCGAAGCG
GACGGTTTTT ACATCGCCCT GCCGACCATG GCTACTGCCA ATGGCATGTA TGCGCGGCTG
GCTCAATCGT ACAGGGCGCT CTTTGGCAGT GATAAAGACA GCGCTCAGGA TTCTCCTATC
TCTCTTATAC TGGCGCATGG TGCCCGAAAC CTCTCCGACC TGTTCATGTC CGGCGTACCC
GATGCCAACG CAGAGTCTGC CATTGATCCT CAGAGCGATG GTCGGGCCTA CTGCGCCACA
TGGCTTGCGG ATTCGCGGAA AAAAGCACTG CTCTCCCCGT GTGGCGTTGG CACAATTGAT
CAGGCGCTGC TCGCAGTGCT GCCCGCACGT CATCAGTGTC TTCGCCTGCT CGGTCTTGCC
CGCAACGTAC TGGTAATAGA CGAGGTACAC GCCTACGACG AATACACCGG TTCACTGCTG
CAGGCTCTGC TCCGCTTTCA TGCCGCCCTC GGGGGCAGCG CCATCCTTCT TTCCGCCACA
CTTACGCGCC GGATACGCCA GAACCTTGCC GCAGCGTTTT GCGAGGGCGC AGGGTATCCC
GCCCCCACGC TGAACGTTGA TGACTTTCCG CTGGCAACCA CAGCCGACAG TCATGGAATG
CGGGAAACTG CCTTTCCAGC CACACGCCGT TCAACAATCC ATGTAAAGCT GACTGCAGAC
GAAAACGCCA TGTACAAAGC GCTGTTGGAA ACCCGCGCCG CCGGCGGTTG CGCATGCTGG
ATACGCAACA CGGTGGATCA GGCGAGAGAA GCCTATGAGC GTCTGCGTGA ACAACATGGC
GTGCCGGAAA AAGATATAAT CCTGTTCCAT GCCCGATTCG CCATGGCCGA CCGCCAGCAC
ATCGAGCAGC GCGTGCTGGC CTTGTTTGGA AAAAACAGCA CGCAGGATGA TCGGCGCAGC
AAGATACTGG TTGCAACGCA GGTTGTGGAA CAAAGTCTGG ATCTGGATTT CGATCAGCTG
AACTCGGACC ACGCCCCTAT GGAACTGCTC ATTCAGCGCG GCGGCCGCTG CCACCGGCAC
AACCGGAACC GCCCCCGGGG GCTTGAATCT CCCCGCATGC TTGTGCTGGC CCCGCAGGCG
CGGAACGATG CCCCGCAGGA TTGGTACGCT TCGGTATTAG GCAAAGCACA GTTTGTGTAC
CCTGTGCAGG CGCCGCTCTG GCGTGCGGCA AAACTGCTGG AAAAAGTAAA GCAACTCACG
CTGCCCGATG ATGCCCGCAG ACTTGTGGAA TCTGTATACG ACGATAACGA GTTTGCTCCT
GAATCCCTGC AGAACGCAGA TGAACGGTAT CTGGCCGAAG CGTTGGGAAA AAAAGATCTC
GCCCGCTTCA ATACATTGAA ACTGGAAGCA GGCTATTCTG TACAAGCTCT TGGCCGCGGG
TGGGAAGATG ACGAATGTGT GGTCACGCGA TTAGGCGAAG AAACTGTTCA GTTGCGGCTT
CTGCGCTGGG ATGGCGGACA ACTGAACCTT TGGGCGGACG GCCCCGGCAT GGCCGCTGCC
TGCCAGCGCT CAGAAGTTCG TGTAAAGAAG GGAAAAGTTA CGCCCTCCGC ACTCCCTCCG
GATGTAGTTG CCCAACTTGC CGCGCTCATG AAACGCATGC CGGATAAGGG CAAGTGGGCC
GTACCGCTGG TACTTCGCAA AGCTGGCGAA ACATGGATCG GCTGGGCAGA ACAAAAGGTG
AGCTACACAA GTTCGCAAGG ACTTCTTTTT ATGGAATAA
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| Protein sequence | MAARVSNDSY YGYWAKFDRN IAPYVHLLPY HLLDVAAVYD SLLNHTPVLQ RRICRLSQLS
PDTIRALLRT LAVLHDLGKF SQIFQEQQPE ARAILTDTPP TGLGGNTHHT ALGQWLYSSV
VRQALEDCHA VFSEDAMDTM RPLVNATFGH HGTPEQESGS IRHFRRATEH AKAFATEAAN
FLLPPIEIPE SEQAFRALSW LHAGLMVVAD WLGSNTRWFP YHAEQMPLET YWNEIALPRA
DRAVRESGIP AAPPHPKRDF TRLLPHLPAN AGPSPLQSHA LYDAIRSSGP QLHIFEDMTG
GGKTEAALLC AHGLMTMSEA DGFYIALPTM ATANGMYARL AQSYRALFGS DKDSAQDSPI
SLILAHGARN LSDLFMSGVP DANAESAIDP QSDGRAYCAT WLADSRKKAL LSPCGVGTID
QALLAVLPAR HQCLRLLGLA RNVLVIDEVH AYDEYTGSLL QALLRFHAAL GGSAILLSAT
LTRRIRQNLA AAFCEGAGYP APTLNVDDFP LATTADSHGM RETAFPATRR STIHVKLTAD
ENAMYKALLE TRAAGGCACW IRNTVDQARE AYERLREQHG VPEKDIILFH ARFAMADRQH
IEQRVLALFG KNSTQDDRRS KILVATQVVE QSLDLDFDQL NSDHAPMELL IQRGGRCHRH
NRNRPRGLES PRMLVLAPQA RNDAPQDWYA SVLGKAQFVY PVQAPLWRAA KLLEKVKQLT
LPDDARRLVE SVYDDNEFAP ESLQNADERY LAEALGKKDL ARFNTLKLEA GYSVQALGRG
WEDDECVVTR LGEETVQLRL LRWDGGQLNL WADGPGMAAA CQRSEVRVKK GKVTPSALPP
DVVAQLAALM KRMPDKGKWA VPLVLRKAGE TWIGWAEQKV SYTSSQGLLF ME
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