| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0834 |
|---|
| Symbol | |
|---|
| ID | 3755712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 860553 |
|---|
| End bp | 861815 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637781699 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_387330 |
|---|
| Protein GI | 78355881 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03016] uncharacterized protein, PEP-CTERM system associated |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATT TCTTCCGGCT CCTTGTGGCT GTGATGCTCA GCCTGCCGCT GTGTGCGCAG
GCTGCGGAAA TCGATCTGAA AGCAGGTATC GGCGCGGGGG GCGAATATAA CGACAACGTG
GATGAACGCG CGGGCGGCCG CGGTGACTTC ATCACACATG TCAAACCCAC GCTGGGAGCC
ACCTACGAAG GGGGCAGGGT AACAGGATCG CTGCTGTATT CAGGCGACTA CCAGTACTAC
AAAGACGGCA CCTATGAAGA CGATTATAAC CACAAGCTTG CGGCCAAGGT GCTGGTCAAT
GCTGTCGAGG ACTTTTTTTA TATAAGCCTG ACAGATACCT ATAGTTCGGT GTATTCAGAT
GCACGGCGGG GTGAAGTCAT TGAAGGTGAC GAGACGTCTT CGTCCGGCAC GGTGGATAAA
AATGTGGCCA CACTGTCGCC GTATTTTGTG CTTAATCCCG ACGAGCGCAC GCAGATAAAT
ACGGGATACA GGCTGCGGGA CGTGCGTTAT GCCCAGAAAG ACGACGGCAC CAACAAAATT
TCGCACGAGC TTTTTGCGGA CGCGAACAGA GAAATTTCTG AACGGTTGAG CGGTCTGGCG
GGGTATTCCT TTACGGTGGA AAACGCCGAA GAGGACGAGG GGTCTTCAGA CGACCTGACG
CGGCACAGAG TTTATGTAGG GGGCACCTAC GACTATGCCG AAGACTCGCG GATTTCCTTG
CGGTTCGGGC CCTCGTTCAA CGAATACGAC AAGGGCGGCT CCGCGGTGGA GATGTACTAC
GAAGCTTCGC TGGTGCACAC ATTCGGTTCG GTGGTGGGTA CGCTTGGTTT CGTGCAGGAT
TATCAGGATG ATCCTGATTC CGGCGAACTG CTGCTGACAA GTACATACTC TGCCGGACTG
ACAAAGATTT TTGACAGGGC AACCCTGTCG CTGAACATGC AGTACCGCGA ATCGGAAGAG
GCTGAAGATT CGGCCGGTGA CGGTCAGGAT TCGGGCAGCG GCACCACCCG CAGCTGGCGG
CCTTCGTTAC GGGGTACATA TGAGCTTTCG CCCAGAGCCA CGCTGGGCGG CGGCCTGACA
TACGAAAGCG AAGACGCCCC CGATGGTGTG ACTGACCGCT GGTACTGTGA TGCTTCGCTG
TCGTACGCCA TGCAGGAGAA TGTTACCGCA AGCCTGACGT ACAGATATAA AAGCGTGGAC
GAAGCGGGTG AAAACCCGTG GGCCGCAAAC CGCATTATGG CCGAAGTCGG CGTCACGTTC
TAA
|
|---|
| Protein sequence | MKYFFRLLVA VMLSLPLCAQ AAEIDLKAGI GAGGEYNDNV DERAGGRGDF ITHVKPTLGA
TYEGGRVTGS LLYSGDYQYY KDGTYEDDYN HKLAAKVLVN AVEDFFYISL TDTYSSVYSD
ARRGEVIEGD ETSSSGTVDK NVATLSPYFV LNPDERTQIN TGYRLRDVRY AQKDDGTNKI
SHELFADANR EISERLSGLA GYSFTVENAE EDEGSSDDLT RHRVYVGGTY DYAEDSRISL
RFGPSFNEYD KGGSAVEMYY EASLVHTFGS VVGTLGFVQD YQDDPDSGEL LLTSTYSAGL
TKIFDRATLS LNMQYRESEE AEDSAGDGQD SGSGTTRSWR PSLRGTYELS PRATLGGGLT
YESEDAPDGV TDRWYCDASL SYAMQENVTA SLTYRYKSVD EAGENPWAAN RIMAEVGVTF
|
|---|
| |