Gene Dde_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0825 
Symbol 
ID3755703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp848561 
End bp849655 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content61% 
IMG OID637781690 
Producthypothetical protein 
Protein accessionYP_387321 
Protein GI78355872 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGC TGGCAGTTAT TGTCCTGTTG CTCGCCCTCG CGGGGGGAGC TTACTACGTT 
CTCAGGCAGG AGCTTGAAAA AAATCCCGCC GTGCTGCTGG ATTCCAGTCC GGCAGCCGAG
CAGGTTGAAA TGCGCCCCGC GCGCATGGCC GTGGCTCCCG GTGTTGTGGA ACCGGTGTCG
GAAGAACGCA GGCTGGGATT TGAAGTAAAC GGCGTGGTGC ATGAAGTAAT GGTAACCGAA
GGGCAGCCCG TGACACAGGG GGCACTGCTG GCCACACTGC GCGACGAAGA ACAGCGGGCC
GCTCTGGCCG CTGCCGAAGC CGAAGCCGCC GCCGCACAGG CAGAGTATGA CAAACTGATC
CGCGGAGCCC GGCCGGCTGA AAAGAGTGAA GCATGGGCCG CCGTGCGCAG CGCGCGTGCC
ATACGTGATC AGGCCCTGAA AGAAGCCAAA CGCCGTGAGC AGCTTGCCGC GCAGAAACAC
ATCGCACCGG AAGAAGCCGA CAGGGCATGG AAGGATTACC GCGTGGCAGC CGAACAGTAT
GAAGAAGCCA GACAACGCTT TGTGCTGGTG GAAGACATGT TCCGCAAAGA AGACATCGCC
AAAGCTTCCT TTCAGTTGCA GAGCGCCACG GCGCGGGTGC GCGAAGCCGA AGCGGCTCTG
GCCAAAACAC GTTTGCGGGC AACGGTTTCC GGCACGGTGC TGCGTGTCAA CCGCAAGGCC
GGAGAGGTTT TTTCGCTTTT TTACGACAGC CCCGTCATTA CCATAGGCAA CATAGCAACT
CTGAATGTGC GTGTGGAAGT GGATGAAAAA GACGTGGCCA GAGTACGCGC GGGACAGCCC
GCCTATGTGG TGGCCGATGC ATACGGCGAC ACACGTTTTG AAGGAACCGT CACCCGGGTG
GAACTGGTGA TGGGTAAAAA ACATACCCGC ACCGGCGACC CTGCCGAGCA TATGGACAGG
CGGGTGCGGG AAGTGCTTGT GACTCTGCGG GGAACCCCGC CGCTTGTCAG CGGTCTGCGG
GTGGACGCCT ACATCGACAC CGGCACCACG CGCGCACAGG CCGCAGAAAC AACCAGAGGA
GCACAACAAC CTTGA
 
Protein sequence
MKQLAVIVLL LALAGGAYYV LRQELEKNPA VLLDSSPAAE QVEMRPARMA VAPGVVEPVS 
EERRLGFEVN GVVHEVMVTE GQPVTQGALL ATLRDEEQRA ALAAAEAEAA AAQAEYDKLI
RGARPAEKSE AWAAVRSARA IRDQALKEAK RREQLAAQKH IAPEEADRAW KDYRVAAEQY
EEARQRFVLV EDMFRKEDIA KASFQLQSAT ARVREAEAAL AKTRLRATVS GTVLRVNRKA
GEVFSLFYDS PVITIGNIAT LNVRVEVDEK DVARVRAGQP AYVVADAYGD TRFEGTVTRV
ELVMGKKHTR TGDPAEHMDR RVREVLVTLR GTPPLVSGLR VDAYIDTGTT RAQAAETTRG
AQQP