| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0817 |
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| Symbol | |
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| ID | 3755695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 837550 |
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| End bp | 839232 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637781682 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_387313 |
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| Protein GI | 78355864 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGTA AGAAATCACT CCGCGTACCG GCACCGCCGG TCGCCGGCGC TCCCTCTGTC
GACAGCGGCG CTCCGTGCAG CGAAGCACTG AAGCACTTTC TCTGCGGTTC CCCTGCCGTT
ATTGTAACAG ATAAAGGCAG CCCCTGCTGC GTGCTGCGCC CCGCCGACAT ACTGGCCGCC
GTGGCAGACC GCGCCGGACT GCAGACTCTG CCGGCCGGCA GTTTTTGCGG CGAAGCCGGA
CAACCGGAAC TGCCTGCACA GCATGATTCC GTATCCGGCC CCGCGGCTGC TGACGCGCCT
GCGGGCTGCC CCGGCGAACA TGCCGGACTG ACAGACGGCA CCGCGGGGCT GCTGCTGGCC
GATGTGGTGC CCGTGCTCAA CATGGCATAC GAACCGCTGC ATCCCGATGA ACCGCTGCTT
AACGCCATGG AAGCACTTGC GGAATGTGAA AACAGTGTTG TTCTGGTACT GGACGGCAAA
GGCACGCCCG CGCTGCTGGA ACGCGGCGAC GTGGCGGCCC TGATGGACTG TTCGGATGAT
CCGTGGTCCA CGCCGCTCGG CAGCTGCGCC AGAGGCAACG TGCTTTCCCT GCCTTCCGCC
ACCGGCGTGC AGGCGGCCTT GAACCGGCTG GAAAATTCAC CCTACAGCCA TGTGCTGGTG
ACAGACGACA GACAGGAACC GGCAGGACTG ATGAGCGTGA GAGAACTGCG TCATGCCGCG
GCCATACGCG ACGCACAGGC AGTGCACAAT CTGCTGGACT GGCAACGCAT ACAGCTGAAT
CAGGAACTGC GCGAACACTC ACAGCGCCTT GCCCAGCTTG AAAATTATCT GTCCGCACAC
CTGCGCACGG GCATCATCGG TATTTCTCCG CAGGGGCGCA TCCTTTTCTG CAGCGGACCC
GCGCTGGACA TTCTGCATGC CATCACCCCC GTAAACCCCA CGGGAAAAGA ACTGCATGTG
CTGGCCCTCA GTATCGACTT TTTCCGGAAG GTACAGCAGG CCCTTGCCGG ATGCGACGCG
TCTTCGCTGT GCACGTTCAG TTACACGTTA CCGCATCCGG AACAGAACAT CATCCACTGC
ACCCTTTCTC ACCTTGCAGA GAACGGACAA CCGCTGGGGC AGGCGCTCAC CATGCGCGAA
GCACCTGACT CCTCCGACCA CCTTTCGCTG GAACAGCAGG CGTTTTACGA TGCCCTGACC
GGCCTGCCCA ACAGGCACCT TTTTGCGGAA CGGGTTTCTC AGGAAATGCG GCGCAGCAGG
CGTGACGGTC TGCGCTTTGC ACTGGCGTTT CTCGATCTTG ATAACTTTAA AGAGATTAAT
GACACCTACG GCCACCTGCT GGGTGACAGT CTGCTGCAGG AGGTGGCGCG CAGGCTGCAG
CGGGGTATCC GGGCTTCTGA CACCGTGGCC CGGTTCGGCG GCGATGAATT TCTGGCTCTG
CTGCCGGAAA CAGCTCCCGG AACGCCTACA CTCAACGTGC TGGAAAAACT GCGCAACAGT
CTGGACAGGC CCTTTGTACT GGACGGGCAC GAACTGACCC TGTGCTGCAG CATAGGTGTG
GCGCATTACC CCGACGATGC GTCCAGTGTA TCCGGGCTGA TGAACACGGC AGACAAGAAC
ATGTATAAAG ACAAAGCCGC GCGCAGGCTT ACCGGCTGCC GCCTGACATC CGACGGACAG
TGA
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| Protein sequence | MTSKKSLRVP APPVAGAPSV DSGAPCSEAL KHFLCGSPAV IVTDKGSPCC VLRPADILAA
VADRAGLQTL PAGSFCGEAG QPELPAQHDS VSGPAAADAP AGCPGEHAGL TDGTAGLLLA
DVVPVLNMAY EPLHPDEPLL NAMEALAECE NSVVLVLDGK GTPALLERGD VAALMDCSDD
PWSTPLGSCA RGNVLSLPSA TGVQAALNRL ENSPYSHVLV TDDRQEPAGL MSVRELRHAA
AIRDAQAVHN LLDWQRIQLN QELREHSQRL AQLENYLSAH LRTGIIGISP QGRILFCSGP
ALDILHAITP VNPTGKELHV LALSIDFFRK VQQALAGCDA SSLCTFSYTL PHPEQNIIHC
TLSHLAENGQ PLGQALTMRE APDSSDHLSL EQQAFYDALT GLPNRHLFAE RVSQEMRRSR
RDGLRFALAF LDLDNFKEIN DTYGHLLGDS LLQEVARRLQ RGIRASDTVA RFGGDEFLAL
LPETAPGTPT LNVLEKLRNS LDRPFVLDGH ELTLCCSIGV AHYPDDASSV SGLMNTADKN
MYKDKAARRL TGCRLTSDGQ
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